Found 25 datasets matching "Environmental DNA metabarcoding".
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This reference contains tabular datasets resulting from the eDNA pilot study on National Wildlife Refuges. 1. ZIP file contains all datasets as received from the authors: a folder for each...
Search relevance: 177.36 | Views last month: 6 -
To evaluate the ability of precipitation-based environmental DNA (eDNA) sample collection and mitochondrial 12S metabarcoding sequencing to reconstruct well-studied fish communities in lakes and...
Search relevance: 177.07 | Views last month: 0 -
The dataset contains sequencing read counts of fish prey eDNA metabarcoding (using primers targeting the 16S rRNA mitochondrial gene) that were extracted from fecal and cloacal swab samples...
Search relevance: 151.50 | Views last month: 0 -
This data set represents environmental DNA (eDNA) data obtained from water samples collected in the Sacramento River watershed and in the Central Valley, CA, USA. Specifically, Metabarcoding and...
Search relevance: 127.36 | Views last month: 13 -
This dataset contains raw sequence data collected from an eDNA metabarcoding project to detect freshwater mussel species across two sites in Georgia (Spring Creek and Flint River) and one drainage...
Search relevance: 120.86 | Views last month: 2 -
This data archive includes R code and data for reproducing the analyses and figures in Lafferty, Metabarcoding is (usually) more cost effective than seining or qPCR for detecting tidewater gobies...
Search relevance: 102.27 | Views last month: 0 -
These metadata contain links to the original sequences on GenBank. These data show the final OTU and metadata tables for each environmental sample collected. Additionally, we included OTU tables...
Search relevance: 96.98 | Views last month: 0 -
Reported here are the metabarcoding read numbers and biomass data assessed from a fish community in a southern Florida pond in Pinecrest Gardens after invasive species eradication and native...
Search relevance: 94.34 | Views last month: 0 -
Amplicon sequence variants from enrichment cultures and non-enriched water samples generated with primer sets targeting the V4 region of the 16SrRNA “This research dataset has been reviewed in...
Search relevance: 92.92 | Views last month: 1 -
DNA metabarcoding data as raw DNA sequences from the DNA sequencing instrument along with spreadsheets of data generated from bioinformatic analyses of the raw data. “This research dataset has...
Search relevance: 83.60 | Views last month: 2 -
Scientists at NOAA's Northeast Fisheries Science Center (NEFSC) are using environmental DNA (eDNA) to identify fish communities and monitor ecosystems by collecting a water sample and analyzing...
Search relevance: 78.90 | Views last month: 1 -
These data include sample information and gene sequence reads for amplicon sequence variants from a study of freezing and storage duration effects on diatom-environment relationships. This...
Search relevance: 71.46 | Views last month: 0 -
The Deep SEARCH Project (Deep sea exploration to advance research on cold corals/canyon/cold seep habitats) included a cruise in April 2019 aboard the NOAA ship Ron Brown to various sites along...
Search relevance: 64.58 | Views last month: 0 -
These raw data associated with this research were collected as part of the United States Environmental Protection Agency's 2018-2019 National Rivers and Streams Assessment (NRSA). The worksheet...
Search relevance: 64.31 | Views last month: 1 -
The data being released were part of a project funded by the United States Environmental Protection Agency (USEPA). This study sought to identify the planktonic communities (cyanobacteria,...
Search relevance: 59.39 | Views last month: 0 -
These data represent environmental DNA detections of freshwater mussels in the Green River, KY, USA; West Virginia long-term water quality monitoring sites, USA; and the Chesapeake Bay and Potomac...
Search relevance: 54.85 | Views last month: 2 -
The data described here, including photographs, genetic sequences, and specimen information, were collected by the NOAA Coral Reef Ecosystem Program (CREP) from Autonomous Reef Monitoring...
Search relevance: 49.84 | Views last month: 0 -
The data described here, including photographs, genetic sequences, and specimen information, were collected by the NOAA Coral Reef Ecosystem Program (CREP) from Autonomous Reef Monitoring...
Search relevance: 49.16 | Views last month: 0 -
This data set is comprised of one table with sampling information and National Center for Biotechnology Information (NCBI) BioProject accession numbers for sequence information of this...
Search relevance: 48.46 | Views last month: 0 -
The data described here includes cytochrome oxidase I (COI) DNA metabarcoding data collected from Autonomous Reef Monitoring Structures (ARMS). ARMS were deployed by the NOAA Pacific Islands...
Search relevance: 19.08 | Views last month: 0
