• Organization: Department of Agriculture
• Updated: 2025-11-21

This dataset contains all data and code necessary to reproduce the analysis described under the heading "Experiment 3" in the manuscript: Taliercio, E., Eickholt, D., Read, Q. D., Carter, T.,...

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• Organization: Department of Agriculture
• Updated: 2024-02-09

As part of our project, “Developing Association Mapping in Polyploid Perennial Biofuel Grasses” (DOE-USDA Plant Feedstock Genomics for Bioenergy Program grant DE-A102-07ER64454)*, two SNP...

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• Organization: Department of Agriculture
• Updated: 2025-11-21

Included in this dataset are SNP and fasta data for the Pea Single Plant Plus Collection (PSPPC) and the PSPPC augmented with 25 P. fulvum accessions. These 6 datasets can be roughly divided into...

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• Organization: Department of Agriculture
• Updated: 2024-02-13

Sequence Retrieval allows users to download nucleotide and protein sequences including chromosomes, scaffolds, genes, mRNAs, transcript coding sequences, protein, reftrans contigs and unigene...

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• Organization: Department of Agriculture
• Updated: 2025-11-21

The Triticeae Toolbox (T3) webportal hosts data generated by the Triticeae Coordinated Agricultural Project (CAP), funded by the National Institute for Food and Agriculture (NIFA) of the United...

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• Organization: Department of Agriculture
• Updated: 2023-11-30

Panzea is an NSF-funded project called "Biology of Rare Alleles in Maize and its Wild Relatives". We are investigating the connection between phenotype (what we see) and genotype (the genes...

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• Organization: Department of Agriculture
• Updated: 2025-11-22

Understanding the ion-specific effects of the mineral elements is a central theme of biology because these ions are fundamental to the composition and maintenance of life. However, experiments...

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• Organization: Department of Agriculture
• Updated: 2025-11-21

This data set contains images of potato tubers from clones in the A08241 F1 breeding population grown in Aberdeen, Idaho during the 2019 field season. Each clone was grown as 8-hill plots and...

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• Organization: Department of Agriculture
• Updated: 2025-11-21

Phenotypic Data A subset of 264 lines from the National Small Grains Collection global hexaploid winter wheat germplasm collection was evaluated under controlled growth chamber conditions for...

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• Organization: Department of Agriculture
• Updated: 2023-12-18

Phenotypic, genotypic, and environment data for the 2014 field season: The data is stored in CyVerse. Data types in this directory tree are: dimension and width profile data collected from scanned...

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• Organization: Department of Agriculture
• Updated: 2025-09-24

Our mission is to support application of low-input sustainable agriculture by: Providing, to the best of our ability, technical information about rhizobia, their preservation, and cultural and...

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• Organization: Department of Agriculture
• Updated: 2025-09-26

Global food availability and security is based on intensive agricultural production. Over the past century, this intensification has relied heavily on producing crops with increasing genetic...

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• Organization: Department of Agriculture
• Updated: 2024-02-09

Not only is cacao the basic ingredient in the world’s favorite confection, chocolate, but it provides a livelihood for over 6.5 million farmers in Africa, South America and Asia and ranks as one...

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• Organization: Department of Agriculture
• Updated: 2024-02-09

This database server is supported in fulfilment of the research mission of the Mycotoxin Prevention and Applied Microbiology Research Unit at the National Center for Agricultural Utilization...

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• Organization: Department of Agriculture
• Updated: 2025-11-21

The goal of the National Microbial Germplasm Program is to ensure that the genetic diversity of agriculturally important microorganisms is maintained to enhance and increase agricultural...

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• Organization: Department of Agriculture
• Updated: 2024-02-13

Association mapping is an efficient approach for the identification of the molecular basis of agronomic traits in crop plants. For this purpose in pea (Pisum sativum L.), we genotyped and...

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• Organization: Department of Agriculture
• Updated: 2025-09-24

Insects impact American agriculture both as destructive and beneficial organisms. Insect pests, parasites, predators, products, and pollinators are all economically important. It is critically...

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• Organization: Department of Agriculture
• Updated: 2025-11-21

Breedbase is a web-based, comprehensive breeding management and analysis software. It can be used to design field layouts, collect phenotypic information using tablets, support the collection of...

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• Organization: Department of Agriculture
• Updated: 2025-11-21

R scripts and associated data used to select the sweetpotato core sets described in: Slonecki, T. J., Rutter, W. B., Olukolu, B. A., Yencho, G. C., Jackson, D. M., & Wadl, P. A. (2023). Genetic...

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• Organization: Department of Agriculture
• Updated: 2024-02-13

CottonGen offers BLAST with genome, transcriptome, peptide and marker sequence databases from Gossypium species. This can be done using nucleotide sequences or peptide sequences. BLAST...

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