Found 22 datasets matching "rDNA".
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Background Ribosomal 16S DNA sequences are an essential tool for identifying and classifying microbes. High-throughput DNA sequencing now makes it economically possible to produce very...
Search relevance: 149.89 | Views last month: 0 -
Background The development of DNA amplification for the direct detection of M. tuberculosis from clinical samples has been a major goal of clinical microbiology during the last ten...
Search relevance: 114.72 | Views last month: 0 -
The bacterial 16S tag-encoded FLX-titanium amplicon pyrosequencing (bTEFAP) method was used to carry out the classification analysis of bacterial flora in adult female and male horn flies and horn...
Search relevance: 53.64 | Views last month: 2 -
Background Interest in methanogens from ruminants has resulted from the role of methane in global warming and from the fact that cattle typically lose 6 % of ingested energy as methane....
Search relevance: 53.19 | Views last month: 0 -
Background Microorganisms inhabiting subterranean oil fields have recently attracted much attention. Since intact groundwater can easily be obtained from the bottom of underground...
Search relevance: 47.51 | Views last month: 0 -
Sequence alignments for cox2 and nc LSU rDNA datasets, as well as a reduced cox2 dataset used to determine the variable molecular characters that help to distinguish between the two new Plasmopara...
Search relevance: 44.35 | Views last month: 0 -
Sequence reads (16S rDNA- and 16S rRNA-based) were processed and analyzed using Mothur software. The results presented in the attached Excel file. Also, the other MS word file includes taxonomic...
Search relevance: 35.73 | Views last month: 14 -
The files provided in this data release are the DNA sequence files referenced in Goldsmith and others (2019), which represent a 16S ribosomal ribonucleic acid (rRNA) gene amplicon survey of...
Search relevance: 33.57 | Views last month: 0 -
Background Although closely related, the alpha-proteobacteria Wolbachia and the Rickettsiacae (Rickettsia and Ehrlichia), employ different evolutionary life history strategies. Wolbachia...
Search relevance: 31.27 | Views last month: 0 -
The Deep SEARCH Project (Deep sea exploration to advance research on cold corals/canyon/cold seep habitats) included a cruise in April 2019 aboard the NOAA ship Ron Brown to various sites along...
Search relevance: 30.34 | Views last month: 0 -
Background The cosmopolitan moon jelly Aurelia is characterized by high degrees of morphological and ecological plasticity, and subsequently by an unclear taxonomic status. The latter...
Search relevance: 28.26 | Views last month: 0 -
Background Oceans are iron-deficient and nutrient-poor environments. These conditions impart limitations on our understanding of and our ability to identify microorganisms from the...
Search relevance: 28.10 | Views last month: 0 -
Background Species of Tetrahymena were grouped into three complexes based on morphological and life history traits: the pyriformis complex of microstomatous forms; the patula complex of...
Search relevance: 25.57 | Views last month: 0 -
GitHub Repository - Description: Contains data, processing and analysis code, initial exploratory figures, final publication figures, and final publication tables. - Link:...
Search relevance: 24.88 | Views last month: 1 -
We report how high and low linear energy transfer (LET) radiation, microgravity, and elevated dietary iron affect colon microbiota (determined by 16S rDNA pyrosequencing) and colon function. Three...
Search relevance: 24.45 | Views last month: 0 -
NCBI BioProject Description: Houses the amplicon sequencing data (16S and ITS) used in the study. BioProject ID: PRJNA1114128 Link: https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA1114128
Search relevance: 23.86 | Views last month: 1 -
The environmental samples were collected with the polyester wipes from eight different locations in the International Space Station (ISS) during two consecutive sampling sessions (three months...
Search relevance: 21.51 | Views last month: 1 -
Presented here is the environmental microbiome study of the International Space Station surfaces. The environmental samples were collected with the polyester wipes from eight different locations...
Search relevance: 20.33 | Views last month: 0 -
The environmental microbiome study was designed to decipher microbial diversity of the International Space Station surfaces in terms of spatial and temporal distributions using 16S and ITS iTag...
Search relevance: 19.63 | Views last month: 0 -
The generic placement of the strawberry leaf blight fungus, formerly known as Phomopsis obscurans has always been subject to uncertainty. These datasets provide the phylogenetic evidence based on...
Search relevance: 19.63 | Views last month: 0
