Found 36 datasets matching "sequence alignment".
-
An interactive Web application that enables users to visualize multiple alignments created by database search results or other software applications. The MSA Viewer allows users to upload an...
Search relevance: 161.22 | Views last month: 3 -
Data file for "Vliet SMF, Hazemi M, Blatz D, Jensen M, Mayasich S, Transue TR, Simmons C, Wilkinson A, LaLone CA. Demonstration of the Sequence Alignment to Predict Across Species Susceptibility...
Search relevance: 135.60 | Views last month: 0 -
All data associated with publication are publicly available online at https://datadryad.org/ by searching doi:10.5061/dryad.2tg6967 Upon accessing data on datadryad.org: Data descriptions are...
Search relevance: 99.44 | Views last month: 0 -
Constraint-Based Multiple Alignment Tool (COBALT) is a protein multiple sequence alignment tool that finds a collection of pairwise constraints derived from conserved domain database, protein...
Search relevance: 56.64 | Views last month: 0 -
Background The Master Catalog is a collection of evolutionary families, including multiple sequence alignments, phylogenetic trees and reconstructed ancestral sequences, for all...
Search relevance: 56.19 | Views last month: 2 -
Dollar spot is one of the most destructive globally distributed diseases of turfgrass. The identity of the fungus responsible for the disease has been the subject of debate for more than 75...
Search relevance: 54.60 | Views last month: 1 -
The generic placement of the strawberry leaf blight fungus, formerly known as Phomopsis obscurans has always been subject to uncertainty. These datasets provide the phylogenetic evidence based on...
Search relevance: 51.50 | Views last month: 0 -
Conserved Domain Database (CDD) is a protein annotation resource that consists of a collection of well-annotated multiple sequence alignment models for ancient domains and full-length proteins.
Search relevance: 48.83 | Views last month: 0 -
Water buffalo (Bubalus bubalis L.) is an important livestock species worldwide. Like many other livestock species, water buffalo lacks high quality and continuous reference genome assembly,...
Search relevance: 47.23 | Views last month: 0 -
Background Noncoding RNA genes produce transcripts that exert their function without ever producing proteins. Noncoding RNA gene sequences do not have strong statistical signals, unlike...
Search relevance: 47.11 | Views last month: 0 -
The files in this data release are the processed DNA consensus sequence alignment files for the chelonid herpesvirus 5 (ChHV-5) genome plus 66 open reading frames representing protien-coding...
Search relevance: 46.74 | Views last month: 0 -
This genetic variation services interconvert and transform short genetic variants between HGVS expressions, VCF format, and the new SPDI (Sequence Position Deletion Insertion) format, based on...
Search relevance: 45.51 | Views last month: 3 -
Background Annotation of eukaryotic genomes is a complex endeavor that requires the integration of evidence from multiple, often contradictory, sources. With the ever-increasing amount...
Search relevance: 41.73 | Views last month: 0 -
Sequence alignments for cox2 and nc LSU rDNA datasets, as well as a reduced cox2 dataset used to determine the variable molecular characters that help to distinguish between the two new Plasmopara...
Search relevance: 41.13 | Views last month: 0 -
Background: Uracil DNA glycosylases (UDGs) are major repair enzymes that protect DNA from mutational damage caused by uracil incorporated as a result of a polymerase error or deamination...
Search relevance: 40.90 | Views last month: 0 -
Snake fungal disease (SFD) is an emerging disease of wild snakes in eastern North America caused by the fungus Ophidiomyces ophiodiicola. Recently, the disease has also been detected in wild snake...
Search relevance: 40.88 | Views last month: 1 -
IncA/C plasmids are a class of plasmids from Enterobacteraciae that are relatively large (49 to >180 kbp), are readily transferred by conjugation, and carry multiple antimicrobial resistance...
Search relevance: 40.51 | Views last month: 0 -
Background Current evidence suggests that lepidopteran baculoviruses may be divided into two phylogenetic groups based on their envelope fusion proteins. One group utilizes gp64, a low...
Search relevance: 40.44 | Views last month: 0
