Cryptobiota metabarcoding using Autonomous Reef Monitoring Structure (ARMS) Deployed at Coral Reef Sites across Hawaiian Archipelago from 2010 to 2016
The data described here includes cytochrome oxidase I (COI) DNA metabarcoding data collected from Autonomous Reef Monitoring Structures (ARMS). ARMS were deployed by the NOAA Pacific Islands Fisheries Science Center (PIFSC), Ecosystem Sciences Division (formerly the Coral Reef Ecosystem Division) under the National Coral Reef Monitoring Program (NCRMP) at stationary climate monitoring sites and used to assess and monitor cryptic reef diversity in the Hawaiian Archipelago. Developed in collaboration with the Census of Marine Life (CoML) Census of Coral Reef Ecosystems (CReefs), ARMS were designed to mimic the structural complexity of a reef and attract/collect colonizing marine invertebrates. The key innovation of the ARMS method is that biodiversity is sampled over precisely the same surface area in the exact same manner.
These data were gathered at specific reef sites across the Hawaiian Archipelago. ARMS units were set-up, deployed and recovered as described in the ARMS record in the related items section below. After ARMS were disassembled, different size fractions of samples and plate scrapings were preserved in ethanol for metabarcoding.
Complete Metadata
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|---|---|
| accessLevel | non-public |
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| describedByType | application/octet-steam |
| description | The data described here includes cytochrome oxidase I (COI) DNA metabarcoding data collected from Autonomous Reef Monitoring Structures (ARMS). ARMS were deployed by the NOAA Pacific Islands Fisheries Science Center (PIFSC), Ecosystem Sciences Division (formerly the Coral Reef Ecosystem Division) under the National Coral Reef Monitoring Program (NCRMP) at stationary climate monitoring sites and used to assess and monitor cryptic reef diversity in the Hawaiian Archipelago. Developed in collaboration with the Census of Marine Life (CoML) Census of Coral Reef Ecosystems (CReefs), ARMS were designed to mimic the structural complexity of a reef and attract/collect colonizing marine invertebrates. The key innovation of the ARMS method is that biodiversity is sampled over precisely the same surface area in the exact same manner. These data were gathered at specific reef sites across the Hawaiian Archipelago. ARMS units were set-up, deployed and recovered as described in the ARMS record in the related items section below. After ARMS were disassembled, different size fractions of samples and plate scrapings were preserved in ethanol for metabarcoding. |
| distribution |
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|
| identifier | gov.noaa.nmfs.inport:64268 |
| issued | 2021-01-01T00:00:00.000+00:00 |
| keyword |
[
"743",
"National Coral Reef Monitoring Program",
"DNA/RNA Sequencing",
"EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment",
"EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Autonomous Reef Monitoring Structure (ARMS)",
"EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > In Situ Biological",
"EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology",
"EARTH SCIENCE > Oceans > Marine Biology > Cryptobiota",
"EARTH SCIENCE > Oceans > Marine Biology > Marine Invertebrates",
"EARTH SCIENCE > Oceans > Marine Biology > Marine Invertebrates > Biodiversity",
"EARTH SCIENCE > Oceans > Marine Biology > Marine Invertebrates > Census",
"EARTH SCIENCE > Oceans > Marine Biology > Marine Invertebrates > Macroinvertebrates",
"INVERTEBRATE SPECIES",
"SPECIES IDENTIFICATION",
"SPECIES IDENTIFICATION - COUNT",
"HI'IALAKAI",
"Oscar Elton Sette",
"CORAL REEF STUDIES",
"Coral Reef Conservation Program",
"National Coral Reef Monitoring Program",
"US DOC; NOAA; NMFS; Pacific Islands Fisheries Science Center; Ecosystem Sciences Division; Coral Reef Ecosystem Program",
"COUNTRY/TERRITORY > United States of America > Hawaii > Hawaii > Hawaii Island (19N155W0003)",
"COUNTRY/TERRITORY > United States of America > Hawaii > Hawaii > Kauai Island (22N159W0001)",
"COUNTRY/TERRITORY > United States of America > Hawaii > Honolulu > French Frigate Shoals (24N166W0001)",
"COUNTRY/TERRITORY > United States of America > Hawaii > Honolulu > Kure Atoll (28N178W0001)",
"COUNTRY/TERRITORY > United States of America > Hawaii > Honolulu > Lisianski Island (25N173W0001)",
"COUNTRY/TERRITORY > United States of America > Hawaii > Honolulu > Northwestern Hawaiian Islands (28N178W0000)",
"COUNTRY/TERRITORY > United States of America > Hawaii > Honolulu > Oahu (21N157W0003)",
"COUNTRY/TERRITORY > United States of America > Hawaii > Honolulu > Pearl and Hermes Reef (27N176W0001)",
"COUNTRY/TERRITORY > United States of America > Hawaii > Maui > Maui Island (20N156W0004)",
"COUNTRY/TERRITORY > United States of America > Hawaiian Islands (21N157W0027)",
"OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands (21N157W0027)",
"OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands > Hawaii Island > Hawaii Island (19N155W0003)",
"OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands > Kauai Island > Kauai Island (22N159W0001)",
"OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands > Maui Island > Maui Island (20N156W0004)",
"OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands > Oahu Island > Oahu (21N157W0003)",
"OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Northwestern Hawaiian Islands (28N178W0000)",
"OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Northwestern Hawaiian Islands > French Frigate Shoals (24N166W0001)",
"OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Northwestern Hawaiian Islands > Kure Atoll (28N178W0001)",
"OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Northwestern Hawaiian Islands > Lisianski Island (25N173W0001)",
"OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Northwestern Hawaiian Islands > Pearl and Hermes Reef (27N176W0001)",
"North Pacific Ocean",
"Papahanaumokuakea Marine National Monument",
"ARMS",
"Autonomous Reef Monitoring Structures",
"CREP",
"CReef",
"Census of Marine Life",
"Coral Reef Ecosystem Program",
"PIFSC",
"Pacific Islands Fisheries Science Center",
"cytochrome oxidase I",
"Triennial",
"MHI",
"Main Hawaiian Islands",
"NWHI",
"Northwestern Hawaiian Islands",
"environmental DNA",
"metabarcoding",
"DOC/NOAA/NMFS/PIFSC > Pacific Islands Fisheries Science Center, National Marine Fisheries Service, NOAA, U.S. Department of Commerce",
"ARMS"
]
|
| landingPage | https://www.fisheries.noaa.gov/inport/item/64268 |
| language |
[]
|
| license | https://creativecommons.org/publicdomain/zero/1.0/ |
| modified | 2021-01-01T00:00:00.000+00:00 |
| publisher |
{
"name": "Pacific Islands Fisheries Science Center",
"@type": "org:Organization"
}
|
| references |
[
"https://www.fisheries.noaa.gov/inportserve/waf/noaa/nmfs/pifsc/dmp/pdf/64268.pdf"
]
|
| rights | otherRestrictions, unclassified |
| spatial | -154.8176,18.968567,-159.6802,22.1669 |
| temporal | 2010-10-11T00:00:00+00:00/2013-08-23T00:00:00+00:00 |
| title | Cryptobiota metabarcoding using Autonomous Reef Monitoring Structure (ARMS) Deployed at Coral Reef Sites across Hawaiian Archipelago from 2010 to 2016 |
