Data and code files for co-occurrence modeling project

Published by U.S. EPA Office of Research and Development (ORD) | U.S. Environmental Protection Agency | Metadata Last Checked: August 02, 2025 | Last Modified: 2017-07-13

Files included are original data inputs on stream fishes (fish_data_OEPA_2012.csv), water chemistry (OEPA_WATER_2012.csv), geographic data (NHD_Plus_StreamCat); modeling files for generating predictions from the original data, including the R code (MVP_R_Final.txt) and Stan code (MV_Probit_Stan_Final.txt); and the model output file containing predictions for all NHDPlus catchments in the East Fork Little Miami River watershed (MVP_EFLMR_cooc_Final). This dataset is associated with the following publication: Martin, R., E. Waits, and C. Nietch. Empirically-based modeling and mapping to consider the co-occurrence of ecological receptors and stressors. SCIENCE OF THE TOTAL ENVIRONMENT. Elsevier BV, AMSTERDAM, NETHERLANDS, 613(614): 1228-1239, (2018).

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Complete Metadata

bureauCode	[ "020:00" ]
describedBy	https://pasteur.epa.gov/uploads/10.23719/1407576/documents/EFLMR_cooc_data_dictionary_Final.xlsx
describedByType	application/vnd.openxmlformats-officedocument.spreadsheetml.sheet
identifier	https://doi.org/10.23719/1407576
programCode	[ "020:095" ]
references	[ "https://doi.org/10.1016/j.scitotenv.2017.08.301" ]
rights	null