Data from: A haplotype-resolved genome assembly of hexaploid Kentucky-31 tall fescue (<i>Lolium arundinaceum</i>)
Genome sequence with structural and functional annotation files of LoarK31 haplotype 1 and haplotype 2 genome assembly reported in the manuscript "A haplotype-resolved genome assembly of hexaploid Kentucky-31 tall fescue (Lolium arundinaceum)". Also included is the transposable element (TE) annotation from EDTA and chloroplast genome with annotation.
Complete Metadata
| @type | dcat:Dataset |
|---|---|
| accessLevel | public |
| bureauCode |
[
"005:18"
]
|
| contactPoint |
{
"fn": "Robbins, Matthew D.",
"hasEmail": "mailto:matthew.robbins@usda.gov"
}
|
| description | <p dir="ltr">Genome sequence with structural and functional annotation files of LoarK31 haplotype 1 and haplotype 2 genome assembly reported in the manuscript "A haplotype-resolved genome assembly of hexaploid Kentucky-31 tall fescue (<i>Lolium arundinaceum</i>)". Also included is the transposable element (TE) annotation from EDTA and chloroplast genome with annotation.</p> |
| distribution |
[
{
"@type": "dcat:Distribution",
"title": "BioProject: PRJNA1312082 LoarK31 haplotype2 genome assembly",
"format": "xml",
"accessURL": "https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1312082",
"mediaType": "text/xml"
},
{
"@type": "dcat:Distribution",
"title": "BioProject: PRJNA1312083 LoarK31 haplotype 1 genome assembly",
"format": "xml",
"accessURL": "https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1312083",
"mediaType": "text/xml"
},
{
"@type": "dcat:Distribution",
"title": "LoarK31v1.0_hap1.fasta.gz",
"format": "gz",
"mediaType": "application/gzip",
"downloadURL": "https://ndownloader.figshare.com/files/57595012"
},
{
"@type": "dcat:Distribution",
"title": "LoarK31v1.0_hap2.fasta.gz",
"format": "gz",
"mediaType": "application/gzip",
"downloadURL": "https://ndownloader.figshare.com/files/57595033"
},
{
"@type": "dcat:Distribution",
"title": "LoarK31v1.0_hap1_proteins.fasta.gz",
"format": "gz",
"mediaType": "application/gzip",
"downloadURL": "https://ndownloader.figshare.com/files/57596926"
},
{
"@type": "dcat:Distribution",
"title": "LoarK31v1.0_hap1_cds.fasta.gz",
"format": "gz",
"mediaType": "application/gzip",
"downloadURL": "https://ndownloader.figshare.com/files/57596929"
},
{
"@type": "dcat:Distribution",
"title": "LoarK31v1.0_hap1.gff.gz",
"format": "gz",
"mediaType": "application/gzip",
"downloadURL": "https://ndownloader.figshare.com/files/57596932"
},
{
"@type": "dcat:Distribution",
"title": "LoarK31v1.0_hap2_proteins.fasta.gz",
"format": "gz",
"mediaType": "application/gzip",
"downloadURL": "https://ndownloader.figshare.com/files/57596938"
},
{
"@type": "dcat:Distribution",
"title": "LoarK31v1.0_hap2_cds.fasta.gz",
"format": "gz",
"mediaType": "application/gzip",
"downloadURL": "https://ndownloader.figshare.com/files/57596941"
},
{
"@type": "dcat:Distribution",
"title": "LoarK31v1.0_hap2.gff.gz",
"format": "gz",
"mediaType": "application/gzip",
"downloadURL": "https://ndownloader.figshare.com/files/57596944"
},
{
"@type": "dcat:Distribution",
"title": "LoarK31v1.0_hap2_TE_annotation.gff3.gz",
"format": "gz",
"mediaType": "application/gzip",
"downloadURL": "https://ndownloader.figshare.com/files/57596974"
},
{
"@type": "dcat:Distribution",
"title": "LoarK31v1.0_hap1_TE_annotation.gff3.gz",
"format": "gz",
"mediaType": "application/gzip",
"downloadURL": "https://ndownloader.figshare.com/files/57596977"
},
{
"@type": "dcat:Distribution",
"title": "LoarK31_chloro.fasta",
"format": "fasta",
"mediaType": "text/plain",
"downloadURL": "https://ndownloader.figshare.com/files/57596980"
},
{
"@type": "dcat:Distribution",
"title": "LoarK31_chloro.gff",
"format": "gff",
"mediaType": "text/plain",
"downloadURL": "https://ndownloader.figshare.com/files/57596983"
}
]
|
| identifier | 10.15482/USDA.ADC/30032191.v1 |
| keyword |
[
"Festuca",
"forage",
"perennial grass",
"single nucleotide polymorphism"
]
|
| license | https://www.usa.gov/publicdomain/label/1.0/ |
| modified | 2026-02-03 |
| programCode |
[
"005:040"
]
|
| publisher |
{
"name": "Agricultural Research Service",
"@type": "org:Organization"
}
|
| temporal | 2022-04-01/2022-04-01 |
| title | Data from: A haplotype-resolved genome assembly of hexaploid Kentucky-31 tall fescue (<i>Lolium arundinaceum</i>) |