Skip to main content
U.S. flag

An official website of the United States government

This site is currently in beta, and your feedback is helping shape its ongoing development.

Return to search results

Data from: Differential gene expression in red imported fire ant (Solenopsis invicta) (Hymenoptera: Formicidae) larval and pupal stages

Published by Agricultural Research Service | Department of Agriculture | Metadata Last Checked: January 27, 2026 | Last Modified: 2025-11-22
12 files (6 sets of paired Illumina FASTQ files) transcriptomes (expressed genes) of the fourth (final) larval and early (white) pupal stages of Solenopsis invicta from Mississippi Delta. Resources in this dataset:Resource Title: RNA-seq Larva sample Colony 1. File Name: A01L4_1.zipResource Description: This is the first of the paired samples; the total set includes 3 paired Illumina files from larvae, and 3 paired Illumina files from pupae. Colony 1 samples are from 4th instar larvae: paired Illumina fastq files A01L4_1 and A01L4_2; and white pupae: X01wp_1 and X01wp_2.Resource Software Recommended: A01L4_1,url: www.cyverse.org Resource Title: RNA-seq Larva sample Colony 1. File Name: A01L4_2.zipResource Description: This is the second of the paired samples for larvae from Colony 1. Colony 1 samples are from 4th instar larvae: paired Illumina fastq files A01L4_1 and A01L4_2; and white pupae: X01wp_1 and X01wp_2.Resource Software Recommended: Any assembly program that handles paired Illumina files,url: www.cyverse.org Resource Title: RNA-seq pupa sample Colony 1. File Name: X01wp_1.zipResource Description: This is the first of the paired samples. Colony 1 samples are from 4th instar larvae: paired Illumina fastq files A01L4_1 and A01L4_2; and white pupae: X01wp_1 and X01wp_2.Resource Software Recommended: Any assembly program that handles paired Illumina files,url: www.cyverse.org Resource Title: RNA-seq pupa sample Colony 1.. File Name: X01wp_2.zipResource Description: This is the second of the paired samples. Colony 1 samples are from 4th instar larvae: paired Illumina fastq files A01L4_1 and A01L4_2; and white pupae: X01wp_1 and X01wp_2.Resource Software Recommended: Any assembly program that can use Illumina paired files,url: www.cyverse.org Resource Title: RNA-seq larva sample Colony 2. File Name: B02L4_2.zipResource Description: This is the second of the paired samples from Colony 2.Resource Software Recommended: Any assembly program that handles Illumina paired files for input,url: www.cyverse.org Resource Title: RNA-seq larva sample Colony 2. File Name: B02L4_1.zipResource Description: This is the first of the paired larva samples. Colony 2 samples include larva paired Illumina files B02L4_1 and B02L4_2, and paired pupa files Y02wp_1 and Y02wp_2.Resource Software Recommended: Any assembly program that handles paired Illumina files,url: www.cyverse.org Resource Title: RNA-seq pupa sample Colony 2. File Name: Y02wp_1.zipResource Description: This is the first of the paired pupa files. The set includes Y02wp_1 and Y02wp_2.Resource Software Recommended: Any assembly program that accepts Illumina paired reads,url: www.cyverse.org Resource Title: RNA-seq pupa sample Colony 2. File Name: Y02wp_2.zipResource Description: This is the second of the paired samples; the Colony 2 pupa samples are Y02wp_1 and Y02wp_2.Resource Software Recommended: Any assembly program that accepts Illumina paired data files,url: www.cyverse.org Resource Title: RNA-seq pupa sample Colony 3. File Name: Z03wp_1.zipResource Description: This is the first of paired sample files: the set includes Z03wp_1 and Z03wp_2.Resource Title: RNA-seq pupa sample Colony 3. File Name: Z03wp_2.zipResource Description: This is the second of the paired sample files: the set includes Z03wp_1 and Z03wp_2Resource Title: RNA-seq larva sample Colony 3. File Name: C03L4_1.zipResource Description: This is the first of the paired sample files: the set includes C03L4_1 and C03L4_2.Resource Title: RNA-seq larva sample Colony 3. File Name: C03L4_2.zipResource Description: This is the second of the paired sample files: the set includes C03L4_1 and C03L4_2

Resources

12 resources available

Find Related Datasets

Click any tag below to search for similar datasets

Complete Metadata
@type dcat:Dataset
accessLevel public
bureauCode 
                                            [
  "005:00",
  "005:18"
]
contactPoint 
                                            {
  "fn": "Allen, Margaret",
  "hasEmail": "mailto:meg.allen@usda.gov"
}
description <p>12 files (6 sets of paired Illumina FASTQ files) transcriptomes (expressed genes) of the fourth (final) larval and early (white) pupal stages of <em>Solenopsis invicta</em> from Mississippi Delta. </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: RNA-seq Larva sample Colony 1.</p> <p>File Name: A01L4_1.zip</p><p>Resource Description: This is the first of the paired samples; the total set includes 3 paired Illumina files from larvae, and 3 paired Illumina files from pupae. Colony 1 samples are from 4th instar larvae: paired Illumina fastq files A01L4_1 and A01L4_2; and white pupae: X01wp_1 and X01wp_2.</p><p>Resource Software Recommended: A01L4_1,url: www.cyverse.org </p></li><br><li><p>Resource Title: RNA-seq Larva sample Colony 1.</p> <p>File Name: A01L4_2.zip</p><p>Resource Description: This is the second of the paired samples for larvae from Colony 1. Colony 1 samples are from 4th instar larvae: paired Illumina fastq files A01L4_1 and A01L4_2; and white pupae: X01wp_1 and X01wp_2.</p><p>Resource Software Recommended: Any assembly program that handles paired Illumina files,url: www.cyverse.org </p></li><br><li><p>Resource Title: RNA-seq pupa sample Colony 1.</p> <p>File Name: X01wp_1.zip</p><p>Resource Description: This is the first of the paired samples. Colony 1 samples are from 4th instar larvae: paired Illumina fastq files A01L4_1 and A01L4_2; and white pupae: X01wp_1 and X01wp_2.</p><p>Resource Software Recommended: Any assembly program that handles paired Illumina files,url: www.cyverse.org </p></li><br><li><p>Resource Title: RNA-seq pupa sample Colony 1..</p> <p>File Name: X01wp_2.zip</p><p>Resource Description: This is the second of the paired samples. Colony 1 samples are from 4th instar larvae: paired Illumina fastq files A01L4_1 and A01L4_2; and white pupae: X01wp_1 and X01wp_2.</p><p>Resource Software Recommended: Any assembly program that can use Illumina paired files,url: www.cyverse.org </p></li><br><li><p>Resource Title: RNA-seq larva sample Colony 2.</p> <p>File Name: B02L4_2.zip</p><p>Resource Description: This is the second of the paired samples from Colony 2.</p><p>Resource Software Recommended: Any assembly program that handles Illumina paired files for input,url: www.cyverse.org </p></li><br><li><p>Resource Title: RNA-seq larva sample Colony 2.</p> <p>File Name: B02L4_1.zip</p><p>Resource Description: This is the first of the paired larva samples. Colony 2 samples include larva paired Illumina files B02L4_1 and B02L4_2, and paired pupa files Y02wp_1 and Y02wp_2.</p><p>Resource Software Recommended: Any assembly program that handles paired Illumina files,url: www.cyverse.org </p></li><br><li><p>Resource Title: RNA-seq pupa sample Colony 2.</p> <p>File Name: Y02wp_1.zip</p><p>Resource Description: This is the first of the paired pupa files. The set includes Y02wp_1 and Y02wp_2.</p><p>Resource Software Recommended: Any assembly program that accepts Illumina paired reads,url: www.cyverse.org </p></li><br><li><p>Resource Title: RNA-seq pupa sample Colony 2.</p> <p>File Name: Y02wp_2.zip</p><p>Resource Description: This is the second of the paired samples; the Colony 2 pupa samples are Y02wp_1 and Y02wp_2.</p><p>Resource Software Recommended: Any assembly program that accepts Illumina paired data files,url: www.cyverse.org </p></li><br><li><p>Resource Title: RNA-seq pupa sample Colony 3.</p> <p>File Name: Z03wp_1.zip</p><p>Resource Description: This is the first of paired sample files: the set includes Z03wp_1 and Z03wp_2.</p></li><br><li><p>Resource Title: RNA-seq pupa sample Colony 3.</p> <p>File Name: Z03wp_2.zip</p><p>Resource Description: This is the second of the paired sample files: the set includes Z03wp_1 and Z03wp_2</p></li><br><li><p>Resource Title: RNA-seq larva sample Colony 3.</p> <p>File Name: C03L4_1.zip</p><p>Resource Description: This is the first of the paired sample files: the set includes C03L4_1 and C03L4_2.</p></li><br><li><p>Resource Title: RNA-seq larva sample Colony 3.</p> <p>File Name: C03L4_2.zip</p><p>Resource Description: This is the second of the paired sample files: the set includes C03L4_1 and C03L4_2</p></li></ul><p></p>
distribution 
                                            [
  {
    "@type": "dcat:Distribution",
    "title": "A01L4_1.zip",
    "format": "zip",
    "mediaType": "application/zip",
    "downloadURL": "https://ndownloader.figshare.com/files/43634028"
  },
  {
    "@type": "dcat:Distribution",
    "title": "A01L4_2.zip",
    "format": "zip",
    "mediaType": "application/zip",
    "downloadURL": "https://ndownloader.figshare.com/files/43634052"
  },
  {
    "@type": "dcat:Distribution",
    "title": "X01wp_1.zip",
    "format": "zip",
    "mediaType": "application/zip",
    "downloadURL": "https://ndownloader.figshare.com/files/43634061"
  },
  {
    "@type": "dcat:Distribution",
    "title": "X01wp_2.zip",
    "format": "zip",
    "mediaType": "application/zip",
    "downloadURL": "https://ndownloader.figshare.com/files/43634076"
  },
  {
    "@type": "dcat:Distribution",
    "title": "B02L4_2.zip",
    "format": "zip",
    "mediaType": "application/zip",
    "downloadURL": "https://ndownloader.figshare.com/files/43634091"
  },
  {
    "@type": "dcat:Distribution",
    "title": "B02L4_1.zip",
    "format": "zip",
    "mediaType": "application/zip",
    "downloadURL": "https://ndownloader.figshare.com/files/43634100"
  },
  {
    "@type": "dcat:Distribution",
    "title": "Y02wp_1.zip",
    "format": "zip",
    "mediaType": "application/zip",
    "downloadURL": "https://ndownloader.figshare.com/files/43634106"
  },
  {
    "@type": "dcat:Distribution",
    "title": "Y02wp_2.zip",
    "format": "zip",
    "mediaType": "application/zip",
    "downloadURL": "https://ndownloader.figshare.com/files/43634124"
  },
  {
    "@type": "dcat:Distribution",
    "title": "Z03wp_1.zip",
    "format": "zip",
    "mediaType": "application/zip",
    "downloadURL": "https://ndownloader.figshare.com/files/43634133"
  },
  {
    "@type": "dcat:Distribution",
    "title": "Z03wp_2.zip",
    "format": "zip",
    "mediaType": "application/zip",
    "downloadURL": "https://ndownloader.figshare.com/files/43634136"
  },
  {
    "@type": "dcat:Distribution",
    "title": "C03L4_1.zip",
    "format": "zip",
    "mediaType": "application/zip",
    "downloadURL": "https://ndownloader.figshare.com/files/43634148"
  },
  {
    "@type": "dcat:Distribution",
    "title": "C03L4_2.zip",
    "format": "zip",
    "mediaType": "application/zip",
    "downloadURL": "https://ndownloader.figshare.com/files/43634160"
  }
]
identifier 10.15482/USDA.ADC/1461500
keyword 
                                            [
  "NP104"
]
license https://www.usa.gov/publicdomain/label/1.0/
modified 2025-11-22
programCode 
                                            [
  "005:037"
]
publisher 
                                            {
  "name": "Agricultural Research Service",
  "@type": "org:Organization"
}
spatial 
                                            "{"type": "Point", "coordinates": [-91.03344, 33.44734]}"
temporal 2016-03-11/2016-03-11
title Data from: Differential gene expression in red imported fire ant (Solenopsis invicta) (Hymenoptera: Formicidae) larval and pupal stages

data.gov

An official website of the GSA's Technology Transformation Services

Looking for U.S. government information and services?
Visit USA.gov