Horizontal Gene Transfer of SGI-4 or a plasmid containing <i>oriT</i><sub>SGI-4</sub> to <i>Salmonella enterica</i> serovar Typhimurium
Conjugation efficiency of Salmonella Genomic Island 4 (SGI-4) from donor Salmonella enterica serovar I 4,[5],12:i:- or a plasmid containing oriTSGI-4 to recipient strain Salmonella enterica serovar Typhimurium. The oriTSGI-4 nucleotide sequences are located in the region that spans nucleotides 4704600-4706000 of the Salmonella enterica serovar I 4,[5],12:i:- strain USDA15WA-1 genome (CP040686). Conjugation efficiency was calculated by dividing the colony forming units (CFU)/mL of transconjugants by the CFU/mL of donors. A transconjugant is a bacterial recipient that received DNA from the donor strain due to horizontal gene transfer.
Complete Metadata
| @type | dcat:Dataset |
|---|---|
| accessLevel | public |
| bureauCode |
[
"005:18"
]
|
| contactPoint |
{
"fn": "Bearson, Bradley, L.",
"hasEmail": "mailto:brad.bearson@usda.gov"
}
|
| description | <p dir="ltr">Conjugation efficiency of <i>Salmonella</i> Genomic Island 4 (SGI-4) from donor <i>Salmonella enterica</i> serovar I 4,[5],12:i:- or a plasmid containing<i> oriT</i><sub>SGI-4</sub> to recipient strain <i>Salmonella enterica</i> serovar Typhimurium<i>.</i> The <i>oriT</i><sub>SGI-4</sub> nucleotide sequences are located in the region that spans nucleotides 4704600-4706000 of the <i>Salmonella enterica</i> serovar I 4,[5],12:i:- strain USDA15WA-1 genome (<a href="https://www.ncbi.nlm.nih.gov/nuccore/CP040686" target="_blank">CP040686</a>). Conjugation efficiency was calculated by dividing the colony forming units (CFU)/mL of transconjugants by the CFU/mL of donors. A transconjugant is a bacterial recipient that received DNA from the donor strain due to horizontal gene transfer.</p> |
| distribution |
[
{
"@type": "dcat:Distribution",
"title": "HGT SGI-4 or oriTSGI-4 to Salmonella enterica serovar Typhimurium.xlsx",
"format": "xlsx",
"mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet",
"downloadURL": "https://ndownloader.figshare.com/files/49432255"
}
]
|
| identifier | 10.15482/USDA.ADC/27115081.v1 |
| keyword |
[
"Horizontal gene transfer",
"Salmonella",
"Salmonella 4,[5],12:i:-",
"Salmonella Genomic Island 4",
"Salmonella enterica serovar I 4,[5],12:i:-",
"bacterial conjugation",
"integrative conjugative element",
"origin of transfer (oriT)"
]
|
| license | https://creativecommons.org/licenses/by/4.0/ |
| modified | 2025-09-29 |
| programCode |
[
"005:040"
]
|
| publisher |
{
"name": "Agricultural Research Service",
"@type": "org:Organization"
}
|
| temporal | 2023-10-01/2023-10-01 |
| title | Horizontal Gene Transfer of SGI-4 or a plasmid containing <i>oriT</i><sub>SGI-4</sub> to <i>Salmonella enterica</i> serovar Typhimurium |
