Neosho Madtom (Noturus placidus) short read archive and whole genome sequence data
Whole genome sequence data from ten Neosho madtom originating from three geographically separated populations. A Neosho madtom genome was de novo assembled and genome size and content were assessed. Genomic DNA was used to construct one small insert paired-end library per fish with an approximate insert size of 300 bp. The library was constructed following the manufacturer’s protocol with reagents supplied in Illumina’s TruSeq DNA PCR-Free sample preparation kit (#FC-121-3001).
Complete Metadata
| accessLevel | public |
|---|---|
| bureauCode |
[
"010:12"
]
|
| contactPoint |
{
"fn": "Mark L Wildhaber",
"@type": "vcard:Contact",
"hasEmail": "mailto:mwildhaber@usgs.gov"
}
|
| description | Whole genome sequence data from ten Neosho madtom originating from three geographically separated populations. A Neosho madtom genome was de novo assembled and genome size and content were assessed. Genomic DNA was used to construct one small insert paired-end library per fish with an approximate insert size of 300 bp. The library was constructed following the manufacturer’s protocol with reagents supplied in Illumina’s TruSeq DNA PCR-Free sample preparation kit (#FC-121-3001). |
| distribution |
[
{
"@type": "dcat:Distribution",
"title": "Digital Data",
"format": "XML",
"accessURL": "https://doi.org/10.5066/P9MAPT9T",
"mediaType": "application/http",
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{
"@type": "dcat:Distribution",
"title": "Original Metadata",
"format": "XML",
"mediaType": "text/xml",
"description": "The metadata original format",
"downloadURL": "https://data.usgs.gov/datacatalog/metadata/USGS.621cdcfed34ec739b2de39cc.xml"
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|
| identifier | http://datainventory.doi.gov/id/dataset/USGS_621cdcfed34ec739b2de39cc |
| keyword |
[
"Aquatic biology",
"Cottonwood River",
"Genetics",
"Kansas",
"Missouri",
"Neosho River",
"Oklahoma",
"USGS:621cdcfed34ec739b2de39cc",
"biota",
"genome assembly",
"madtom"
]
|
| modified | 2022-02-28T00:00:00Z |
| publisher |
{
"name": "U.S. Geological Survey",
"@type": "org:Organization"
}
|
| spatial | -96.492999999999, 36.9405, -94.997899999998, 38.5162 |
| theme |
[
"Geospatial"
]
|
| title | Neosho Madtom (Noturus placidus) short read archive and whole genome sequence data |
