Pilot-scale simulators and metagenomic to understand the storage tank ecosystem (JAWWA)
An abundance matrix (Table - 16S rRNA taxonomy.xlsx) contains rows as taxonomic lineage, columns as samples, and entries representing the abundance of each lineage as a number of reads and percentage of all reads obtained for each individual sample.
A table (Table - antibiotic resistance genes.xlsx) contains rows as antibiotic resistance genes (AMR), columns as AMR gene symbol, AMR gene name, AMR type, AMR subtype, AMR class, and AMR subclass at each tank.
A table (Table - metabolic pathways relative abundance.xlsx) contains rows as metabolic pathways, columns as samples, and entries representing the relative abundance of each pathway.
A table (Table - samples.xlsx) with description of storage tank and their locations.
Complete Metadata
| accessLevel | public |
|---|---|
| bureauCode |
[
"020:00"
]
|
| contactPoint |
{
"fn": "Vicente Gomez-Alvarez",
"hasEmail": "mailto:gomez-alvarez.vicente@epa.gov"
}
|
| description | An abundance matrix (Table - 16S rRNA taxonomy.xlsx) contains rows as taxonomic lineage, columns as samples, and entries representing the abundance of each lineage as a number of reads and percentage of all reads obtained for each individual sample. A table (Table - antibiotic resistance genes.xlsx) contains rows as antibiotic resistance genes (AMR), columns as AMR gene symbol, AMR gene name, AMR type, AMR subtype, AMR class, and AMR subclass at each tank. A table (Table - metabolic pathways relative abundance.xlsx) contains rows as metabolic pathways, columns as samples, and entries representing the relative abundance of each pathway. A table (Table - samples.xlsx) with description of storage tank and their locations. |
| distribution |
[
{
"title": "Table - 16S rRNA taxonomy.xlsx",
"mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet",
"downloadURL": "https://pasteur.epa.gov/uploads/10.23719/1529128/Table%20-%2016S%20rRNA%20taxonomy.xlsx"
},
{
"title": "Table - antibiotic resistance genes.xlsx",
"mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet",
"downloadURL": "https://pasteur.epa.gov/uploads/10.23719/1529128/Table%20-%20antibiotic%20resistance%20genes.xlsx"
},
{
"title": "Table - metabolic pathways relative abundance.xlsx",
"mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet",
"downloadURL": "https://pasteur.epa.gov/uploads/10.23719/1529128/Table%20-%20metabolic%20pathways%20relative%20abundance.xlsx"
},
{
"title": "Table - samples.xlsx",
"mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet",
"downloadURL": "https://pasteur.epa.gov/uploads/10.23719/1529128/Table%20-%20samples.xlsx"
}
]
|
| identifier | https://doi.org/10.23719/1529128 |
| keyword |
[
"drinking water distribution systems",
"microbial communities",
"storage tanks"
]
|
| license | https://pasteur.epa.gov/license/sciencehub-license.html |
| modified | 2023-05-18 |
| programCode |
[
"020:000"
]
|
| publisher |
{
"name": "U.S. EPA Office of Research and Development (ORD)",
"subOrganizationOf": {
"name": "U.S. Environmental Protection Agency",
"subOrganizationOf": {
"name": "U.S. Government"
}
}
}
|
| references |
null
|
| rights |
null
|
| title | Pilot-scale simulators and metagenomic to understand the storage tank ecosystem (JAWWA) |
