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Species ID Project
Up to 10 individuals of a fin fish, shark, and crustacean species are collected and morphologically identified by Southeast Fisheries Science Center. Water-soluble sarcoplasmic proteins are extracted from the tissue; proteins are analyzed by microfluidic electrophoresis (Agilent Bioanalyzer 2100) to generate species-specific protein patterns. The protein patterns are entered into a database to determine which are the most abundant for each species. The proteins that are seen in all 10 individuals are transferred to the excel pattern matching library database that uses NSIL designed formulas to calculate the range of each protein (+/- 1.5 to 3%) and compare an unknown protein to pattern to those in the pattern matching library.
Complete Metadata
| @type | dcat:Dataset |
|---|---|
| accessLevel | non-public |
| contactPoint |
{
"fn": "Bell, Jon",
"@type": "vcard:Contact",
"hasEmail": "mailto:jon.bell@noaa.gov"
}
|
| describedByType | application/octet-steam |
| description | Up to 10 individuals of a fin fish, shark, and crustacean species are collected and morphologically identified by Southeast Fisheries Science Center. Water-soluble sarcoplasmic proteins are extracted from the tissue; proteins are analyzed by microfluidic electrophoresis (Agilent Bioanalyzer 2100) to generate species-specific protein patterns. The protein patterns are entered into a database to determine which are the most abundant for each species. The proteins that are seen in all 10 individuals are transferred to the excel pattern matching library database that uses NSIL designed formulas to calculate the range of each protein (+/- 1.5 to 3%) and compare an unknown protein to pattern to those in the pattern matching library. |
| distribution |
[
{
"@type": "dcat:Distribution",
"title": "Species ID",
"mediaType": "placeholder/value",
"downloadURL": "https://noaa-fisheries-hq.data.socrata.com/Seafood-Safety/Species-Protein-Repeatability/ub94-pbzc",
"describedByType": "application/octet-steam"
},
{
"@type": "dcat:Distribution",
"title": "NOAA Data Management Plan (DMP)",
"mediaType": "placeholder/value",
"description": "NOAA Data Management Plan for this record on InPort.",
"downloadURL": "https://www.fisheries.noaa.gov/inportserve/waf/noaa/nmfs/osf/dmp/pdf/28654.pdf",
"describedByType": "application/octet-steam"
},
{
"@type": "dcat:Distribution",
"title": "GCMD Keyword Forum Page",
"mediaType": "placeholder/value",
"description": "Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 22. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords",
"downloadURL": "https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords",
"describedByType": "application/octet-steam"
},
{
"@type": "dcat:Distribution",
"title": "Full Metadata Record",
"mediaType": "placeholder/value",
"description": "View the complete metadata record on InPort for more information about this dataset.",
"downloadURL": "https://www.fisheries.noaa.gov/inport/item/28654",
"describedByType": "application/octet-steam"
}
]
|
| identifier | gov.noaa.nmfs.inport:28654 |
| keyword |
[
"Protein patterns",
"Species ID",
"DOC/NOAA/NMFS/OSF > Office of Sustainable Fisheries, National Marine Fisheries Service, NOAA, U.S. Department of Commerce",
"Species ID Project"
]
|
| landingPage | https://www.fisheries.noaa.gov/inport/item/28654 |
| language |
[]
|
| license | https://creativecommons.org/publicdomain/zero/1.0/ |
| modified | 2024-02-29T00:00:00.000+00:00 |
| publisher |
{
"name": "NMFS Office Of Sustainable Fisheries",
"@type": "org:Organization"
}
|
| references |
[
"https://www.fisheries.noaa.gov/inportserve/waf/noaa/nmfs/osf/dmp/pdf/28654.pdf"
]
|
| rights | otherRestrictions, unclassified |
| temporal | 2011-01-01T00:00:00+00:00/2011-01-01T00:00:00+00:00 |
| title | Species ID Project |
