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Transcriptome Shotgun Assembly (TSA) Sequence Database and Submissions
TSA is an archive of computationally assembled transcript sequences from primary data such as ESTs and Next Generation Sequencing Technologies. The overlapping sequence reads from a complete transcriptome are assembled into transcripts by computational methods instead of by traditional cloning and sequencing of cloned cDNAs. The primary sequence data used in the assemblies must have been experimentally determined by the same submitter. TSA sequence records differ from GenBank records because there are no physical counterparts to the assemblies.
Complete Metadata
| @type | dcat:Dataset |
|---|---|
| accessLevel | public |
| bureauCode |
[
"009:25"
]
|
| contactPoint |
{
"fn": "National Library of Medicine",
"@type": "vcard:Contact",
"hasEmail": "mailto:custserv@nlm.nih.gov"
}
|
| description | TSA is an archive of computationally assembled transcript sequences from primary data such as ESTs and Next Generation Sequencing Technologies. The overlapping sequence reads from a complete transcriptome are assembled into transcripts by computational methods instead of by traditional cloning and sequencing of cloned cDNAs. The primary sequence data used in the assemblies must have been experimentally determined by the same submitter. TSA sequence records differ from GenBank records because there are no physical counterparts to the assemblies. |
| distribution |
[
{
"@type": "dcat:Distribution",
"title": "TSA Submission Portal",
"mediaType": "text/html",
"description": "Submission details can be found in the TSA submission guide. https://www.ncbi.nlm.nih.gov/genbank/tsaguide",
"downloadURL": "https://submit.ncbi.nlm.nih.gov/subs/tsa/"
},
{
"@type": "dcat:Distribution",
"title": "Download TSA",
"mediaType": "text/html",
"downloadURL": "https://ftp.ncbi.nlm.nih.gov/genbank/tsa/"
},
{
"@type": "dcat:Distribution",
"title": "TSA - Query Interface",
"mediaType": "text/html",
"downloadURL": "https://www.ncbi.nlm.nih.gov/Traces/wgs/?term=tsa"
}
]
|
| identifier | https://datadiscovery.nlm.nih.gov/api/views/fj8w-mvxu |
| issued | 2021-08-26 |
| keyword |
[
"dataset",
"genomics",
"tools & utilities"
]
|
| landingPage | https://www.ncbi.nlm.nih.gov/genbank/tsa/ |
| license | http://opendefinition.org/licenses/odc-odbl/ |
| modified | 2025-06-18 |
| programCode |
[
"009:041"
]
|
| publisher |
{
"name": "National Library of Medicine",
"@type": "org:Organization"
}
|
| theme |
[
"Biology"
]
|
| title | Transcriptome Shotgun Assembly (TSA) Sequence Database and Submissions |
