Found 32 datasets matching "Contigs".
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Here we explore the incidence and abundance of currently known honey bee pathogens in colonies suffering from Colony Collapse Disorder (CCD), otherwise weak colonies, and strong colonies from...
Search relevance: 48.46 | Views last month: 1 -
These data represent V. destructor genomic annotations to be used for evolutionary comparison with other arthropods. The ectoparasitic mite Varroa destructor has emerged as the primary pest of...
Search relevance: 45.20 | Views last month: 0 -
[ NOTE - Data files added 2022-11-01: Test long reads - test.1.filtered.bam_.gz Test short reads R1 - testpolish_R1.fastq Test short reads R2 - testpolish_R2.fastq Chromosome 30 of H. zea -...
Search relevance: 44.77 | Views last month: 0 -
A survey of public honey bee sequence data was performed to detect infections by Lake Sinai Virus (LSV). The Sequence Read Archive of the National Center for Biotechnology Information (NCBI) was...
Search relevance: 40.93 | Views last month: 0 -
FASTA files containing the sequence data and for Assembled contigs (FastA), Predicted genes (FastA), Predicted proteins (FastA), Gene prediction (GFF v2). This dataset is not publicly accessible...
Search relevance: 40.19 | Views last month: 0 -
The fasta files (Genome_Set01.zip) contain the reference-assisted de novo assemblies (as contigs) of four Campylobacter spp. isolates. The table contains rows as isolates (yellow) and columns as...
Search relevance: 38.97 | Views last month: 0 -
The fasta files (Genome_Set01.zip) contain the reference-assisted de novo assemblies (as contigs) of three Escherichia coli isolates. The table contains rows as isolates (yellow) and columns as...
Search relevance: 36.71 | Views last month: 0 -
Sequence Retrieval allows users to download nucleotide and protein sequences including chromosomes, scaffolds, genes, mRNAs, transcript coding sequences, protein, reftrans contigs and unigene...
Search relevance: 36.29 | Views last month: 0 -
A-3txf_sequence summary.xksx: Abundance of contigs or unique sequences for each biofilm samples from anodes in the MEC reactor Hodon Waterloo final_fasta_working.docx: Raw sequences with their...
Search relevance: 35.24 | Views last month: 1 -
The fasta files (Genome_Set01.zip) contain the reference-assisted de novo assemblies (as contigs) of seven Legionella pneumophila subps. pneumophila isolates. The table contains rows as isolates...
Search relevance: 35.02 | Views last month: 0 -
The Baylor College of Medicine recently sequenced and annotated the Leptinotarsa decemlineata genome as part of the i5k pilot project. This dataset presents the Leptinotarsa decemlineata genome...
Search relevance: 35.02 | Views last month: 0 -
A high-quality reference genome is an essential tool for applied and basic research on arthropods. Long-read sequencing technologies may be used to generate more complete and contiguous genome...
Search relevance: 34.12 | Views last month: 2 -
The Asian giant hornet, Vespa mandarinia, has a native range that extends from northern India to East Asia. In 2019, the hornet was confirmed for the first time in North America, posing an...
Search relevance: 33.48 | Views last month: 2 -
The objective was to generate a high-quality draft assembly of the whole genome as a resource for future applications such as temporal and spatial dispersal studies of the pathogen and to...
Search relevance: 32.22 | Views last month: 1 -
Supplemental information from a project describing the transcriptome of a beetle parasite of honey bees The small hive beetle (SHB), Aethina tumida, is a major pest of managed honey bee (Apis...
Search relevance: 32.19 | Views last month: 0 -
NOTE: This dataset is no longer publicly available. This database houses over 500,000 sequences that were generated and assembled into approximately 15,000 contigs, annotated and functionally...
Search relevance: 32.11 | Views last month: 1 -
A table (DP_SRA.xlsx) contains rows as sample and columns as entries representing the biosample accession number (NCBI), collection (date), library strategy, target (source), and sequencing...
Search relevance: 31.71 | Views last month: 0 -
The longhorned tick, Haemaphysalis longicornis, feeds upon a wide range of bird and mammalian hosts. Mammalian hosts include cattle, deer, sheep, goats, humans, and horses. This tick is known to...
Search relevance: 31.19 | Views last month: 0 -
Colletotrichum shisoi is a fungal plant pathogen of Perilla frutescens, a mint species cultivated in some Asian countries but considered invasive in the United States. This dataset contains a new,...
Search relevance: 31.10 | Views last month: 1 -
The Baylor College of Medicine recently sequenced and annotated the Homalodisca vitripennis genome as part of the i5k pilot project. The Glassy-winged sharpshooter, GWSS, (Homalodisca vitripennis)...
Search relevance: 30.64 | Views last month: 1
