Found 50 datasets matching "DNA metabarcoding".
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These are auxiliary data that complement the dataset associated with subproduct SSWR.401.1.2.24 and can be used to further explore and expand approaches and applications developed therein....
Search relevance: 216.33 | Views last month: 1 -
Dataset contains site x zooplankton taxa data from Lake Superior in 2016. Different tabs have data from morphological ID and from DNA metabarcoding ID with 4 different genetic markers. This...
Search relevance: 211.29 | Views last month: 0 -
DNA sequence data output with assigned taxonomic IDs. This dataset is associated with the following publication: Hatzenbuhler, C., J.R. Kelly, J. Martinson, S. Okum, and E. Pilgrim. Sensitivity...
Search relevance: 185.60 | Views last month: 0 -
These diet data were collected from the Porcupine caribou herd in northern Alaska and Yukon in summer 2021 during 4 periods: calving (occasion 1), post-calving (occasion 2), mosquito harassment...
Search relevance: 178.95 | Views last month: 0 -
LMR watershed temporal DNA metabarcoding 2016 study. This dataset is associated with the following publication: Smucker, N., E. Pilgrim, H. Wu, C. Nietch, J. Darling, M. Molina, B. Johnson, and...
Search relevance: 178.61 | Views last month: 0 -
This reference contains tabular datasets resulting from the eDNA pilot study on National Wildlife Refuges. 1. ZIP file contains all datasets as received from the authors: a folder for each...
Search relevance: 137.53 | Views last month: 6 -
To evaluate the ability of precipitation-based environmental DNA (eDNA) sample collection and mitochondrial 12S metabarcoding sequencing to reconstruct well-studied fish communities in lakes and...
Search relevance: 136.52 | Views last month: 0 -
DNA metabarcoding data as raw DNA sequences from the DNA sequencing instrument along with spreadsheets of data generated from bioinformatic analyses of the raw data. “This research dataset has...
Search relevance: 122.85 | Views last month: 2 -
The dataset contains sequencing read counts of fish prey eDNA metabarcoding (using primers targeting the 16S rRNA mitochondrial gene) that were extracted from fecal and cloacal swab samples...
Search relevance: 121.24 | Views last month: 0 -
The raw data consisted of demultiplexed fastq files pairs (R1.fastq and R2.fastq) per sample accessible on the NCBI Sequences Read Archive (SRA) under the BioProject accession numbers...
Search relevance: 106.55 | Views last month: 0 -
This data set represents environmental DNA (eDNA) data obtained from water samples collected in the Sacramento River watershed and in the Central Valley, CA, USA. Specifically, Metabarcoding and...
Search relevance: 105.27 | Views last month: 13 -
We investigated the summer diets of feral burros (Equus asinus) in two ecosystems in which they are found in the United States: a subtropical desert in Arizona (Lake Pleasant Herd Management Area;...
Search relevance: 100.09 | Views last month: 0 -
These raw data associated with this research were collected as part of the United States Environmental Protection Agency's 2018-2019 National Rivers and Streams Assessment (NRSA). The worksheet...
Search relevance: 97.27 | Views last month: 1 -
Amplicon sequence variants from enrichment cultures and non-enriched water samples generated with primer sets targeting the V4 region of the 16SrRNA. “This research dataset has been reviewed in...
Search relevance: 97.23 | Views last month: 2 -
This dataset contains raw sequence data collected from an eDNA metabarcoding project to detect freshwater mussel species across two sites in Georgia (Spring Creek and Flint River) and one drainage...
Search relevance: 95.63 | Views last month: 2 -
This data archive includes R code and data for reproducing the analyses and figures in Lafferty, Metabarcoding is (usually) more cost effective than seining or qPCR for detecting tidewater gobies...
Search relevance: 87.54 | Views last month: 0 -
This data package contains four tables related to helminths and bacteria identified in the guts of North American shrews (Genus: Sorex). Tables include: two tables of specimen information about...
Search relevance: 84.77 | Views last month: 0 -
This data set describes nucleotide sequence data derived from 18S ribosomal DNA amplified in two fragments. A total of 87 feces from Pacific walrus and 57 marine invertebrates were examined for...
Search relevance: 80.91 | Views last month: 0 -
This dataset is one table with data collected and derived from polar bears sampled in Alaska's southern Beaufort Sea during 2015-2019. Data include demographic and morphometric information from...
Search relevance: 80.35 | Views last month: 1 -
The data described here includes cytochrome oxidase I (COI) DNA metabarcoding data collected from Autonomous Reef Monitoring Structures (ARMS). ARMS were deployed by the NOAA Pacific Islands...
Search relevance: 76.02 | Views last month: 0
