Found 30 datasets matching "Fasta file".
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A table (DP_SRA.xlsx) contains rows as sample and columns as entries representing the biosample accession number (NCBI), collection (date), library strategy, target (source), and sequencing...
Search relevance: 52.44 | Views last month: 0 -
A-3txf_sequence summary.xksx: Abundance of contigs or unique sequences for each biofilm samples from anodes in the MEC reactor Hodon Waterloo final_fasta_working.docx: Raw sequences with their...
Search relevance: 45.78 | Views last month: 1 -
Influenza A virus in swine hemagglutinin (HA) gene sequence data for 9 virus strains. Resources in this dataset:Resource Title: H1N1pdm09 HA gene sequences. File Name:...
Search relevance: 40.26 | Views last month: 0 -
Included in this dataset are SNP and fasta data for the Pea Single Plant Plus Collection (PSPPC) and the PSPPC augmented with 25 P. fulvum accessions. These 6 datasets can be roughly divided into...
Search relevance: 38.89 | Views last month: 1 -
The fasta file (BM_OTU.fasta) contain the sequences of the bacterial 16S rRNA-encoding V4 region gene (≈250 nt) for each Operational Taxonomic Unit (OTU). This dataset is associated with the...
Search relevance: 38.78 | Views last month: 9 -
High-throughput methods for identification of pollinator taxa are desirable to improve our understanding of pollinator distributions, population trends, and ecology. Genetic sequencing of...
Search relevance: 37.31 | Views last month: 2 -
This repository contains the dataset used in the manuscript "Inter-tool analysis of a NIST dataset for assessing baseline nucleic acid sequence screening". NIST constructed the test dataset based...
Search relevance: 36.51 | Views last month: 1 -
Corn (Zea mays) is one of the most widely grown crops throughout the world. However, many corn fields develop pest problems such as corn borers every year that seriously affect its yield and...
Search relevance: 36.07 | Views last month: 4 -
Data included are DNA sequences used to identify species boundaries among Ichthyophonus-like parasites. Sequences were generated for three gene regions from each parasite isolate. DNA sequences...
Search relevance: 35.62 | Views last month: 0 -
The Imperfect SSR Finder is an online tool to help geneticists find Simple Sequence Repeats (SSR), aka microsatellites or Short Tandem Repeats (STR), in uploaded FASTA sequences. The Imperfect SSR...
Search relevance: 35.31 | Views last month: 0 -
A proteome profiling approach was taken to characterize the cellular biology of massive corals of the Upper Florida Keys exposed to experimentally elevated temperatures. Specifically, Orbicella...
Search relevance: 33.81 | Views last month: 1 -
Genome sequence with gene annotation files of the creeping bentgrass cultivar 'Declaration' genome assembly reported in the manuscript "Haplotype-resolved chromosome-level genome assembly of...
Search relevance: 33.78 | Views last month: 0 -
Biological indicator taxa have long been used for integrative assessments of water quality, particularly benthic invertebrate groups such as arthropods. While standardized protocols have been...
Search relevance: 32.31 | Views last month: 0 -
A high-quality reference genome is an essential tool for applied and basic research on arthropods. Long-read sequencing technologies may be used to generate more complete and contiguous genome...
Search relevance: 30.87 | Views last month: 2 -
The Asian giant hornet, Vespa mandarinia, has a native range that extends from northern India to East Asia. In 2019, the hornet was confirmed for the first time in North America, posing an...
Search relevance: 30.69 | Views last month: 2 -
Organisms living in honey bees and honey bee colonies form large associative holobiont communities that are integral to bee biology. High-throughput sequencing approaches to characterize these...
Search relevance: 30.31 | Views last month: 1 -
To study the impact of wheat streak mosaic virus on global gene expression in wheat curl mite, we generated a de novo transcriptome assembly using 50 x 50 paired end reads from the Illumina HiSeq...
Search relevance: 29.79 | Views last month: 0 -
As monoclonal antibodies have become a vital resource in medicine, knowledge of their complex molecular structures has increased in importance. Thousands of Fab and Fc fragments are described in...
Search relevance: 29.61 | Views last month: 8 -
This collection contains supplementary data for the manuscript "Genotypic characterization of the U.S. Peanut Core Collection", which describes genotyping results for the USDA peanut core...
Search relevance: 28.22 | Views last month: 0 -
Background A computational system for analysis of the repetitive structure of genomic sequences is described. The method uses suffix trees to organize and search the input sequences;...
Search relevance: 27.77 | Views last month: 0
