Found 38 datasets matching "gene annotation".
-
The current speed of sequencing already exceeds the capability of annotation. A new method for functional annotation is proposed using the conservation patterns of gene clusters and has been...
Search relevance: 223.43 | Views last month: 0 -
Background The recent draft assembly of the human genome provides a unified basis for describing genomic structure and function. The draft is sufficiently accurate to provide useful...
Search relevance: 118.98 | Views last month: 0 -
Background Annotation of eukaryotic genomes is a complex endeavor that requires the integration of evidence from multiple, often contradictory, sources. With the ever-increasing amount...
Search relevance: 108.02 | Views last month: 0 -
Within this dataset: Genome assembly of Linum lewisii (NDSU_LiLewi_1.0.fasta) First 9 scaffolds represent all 9 chromosomes (e.g. Scaffold_1 is Chromosome 1, Scaffold_9 is Chromosome...
Search relevance: 75.23 | Views last month: 1 -
Manual annotation at the i5k Workspace@NAL (https://i5k.nal.usda.gov) is the review and improvement of gene models derived from computational gene prediction. Community curators compare an...
Search relevance: 74.30 | Views last month: 2 -
Genome sequence with gene annotation files of the creeping bentgrass cultivar 'Declaration' genome assembly reported in the manuscript "Haplotype-resolved chromosome-level genome assembly of...
Search relevance: 72.05 | Views last month: 1 -
We present the annotation results of 15 arthropod proteomes using an open source, open access and containerized pipeline for genome-scale functional annotation of insect proteomes and apply it to...
Search relevance: 62.75 | Views last month: 0 -
The Leptinotarsa decemlineata genome was recently sequenced and annotated as part of the i5k pilot project by the Baylor College of Medicine. This dataset presents the Leptinotarsa decemlineata...
Search relevance: 58.97 | Views last month: 0 -
This dataset presents the Halyomorpha halys Official Gene Set (OGS) v1.2. OGSv1.2 is an update of Halyomorpha halys OGSv1.1 (https://doi.org/10.15482/USDA.ADC/1504240) to the coordinates of genome...
Search relevance: 58.57 | Views last month: 1 -
Annotation data were generated from existing genome assemblies of Calonectria henricotiae JAC13-131 (aka P-10-5865) and C. pseudonaviculata JAC13-27 (aka CT1). Gene prediction and annotations were...
Search relevance: 56.57 | Views last month: 0 -
These files represent the final annotations for two hydrangea genomes derived from BRAKER2 using total RNAs extracted from seven tissue types, including sepals, buds, flowers, nodes, internodes,...
Search relevance: 54.88 | Views last month: 3 -
Background Since the genome of Escherichia coli K-12 was initially annotated in 1997, additional functional information based on biological characterization and functions of...
Search relevance: 54.43 | Views last month: 0 -
This in-house annotated gene set was created using the following methods. RNA was isolated from the head and thorax segments of one adult male and one adult female pecan weevil using the NucleoMag...
Search relevance: 53.24 | Views last month: 0 -
data sets included in this study: Differential Expressed gene lists for nano Cu CuCl2 treated HepG2 cells through RNA sequencing. Differential Expressed microRNA lists for nano Cu and CuCl2...
Search relevance: 52.37 | Views last month: 0 -
Blueberry is an economically important berry crop. Both production and consumption of blueberries have increased sharply worldwide in recent years at least partly due to their known health...
Search relevance: 51.75 | Views last month: 1 -
Background: Standard archival sequence databases have not been designed as tools for genome annotation and are far from being optimal for this purpose. We used the database of Clusters...
Search relevance: 51.24 | Views last month: 0 -
The Hyalella azteca genome was recently sequenced and annotated as part of the i5k pilot project by the Baylor College of Medicine. The Hyalella azteca research community has manually reviewed...
Search relevance: 50.62 | Views last month: 0 -
The Oncopeltus fasciatus genome was recently sequenced and annotated as part of the i5k pilot project by the Baylor College of Medicine. The O. fasciatus research community has manually reviewed...
Search relevance: 50.55 | Views last month: 1 -
Background: Sodium bicarbonate cotransporter (NBC) genes encode proteins that execute coupled Na+ and HCO3- transport across epithelial cell membranes. We report the discovery,...
Search relevance: 49.50 | Views last month: 0 -
The Aga, also known as the Mariana Crow, is an endangered endemic crow of the Northern Mariana Islands, a Commonwealth of the United States of America. The only known population currently extant...
Search relevance: 49.39 | Views last month: 2
