• Organization: U.S. Department of Health & Human Services
• Updated: 2025-09-06

Background Single nucleotide polymorphisms (SNPs) are the foundation of powerful complex trait and pharmacogenomic analyses. The availability of large SNP databases, however, has...

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• Organization: Department of Agriculture
• Updated: 2025-11-21

High-throughput sequencing (HTS) of reduced representation genomic libraries has ushered in an era of genotyping-by-sequencing (GBS), where genome-wide genotype data can be obtained for nearly any...

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• Organization: U.S. Department of Health & Human Services
• Updated: 2025-09-06

Background Some pathogenic bacteria are genetically very homogeneous, making strain discrimination difficult. In the last few years, tandem repeats have been increasingly recognized as...

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• Organization: Department of Agriculture
• Updated: 2025-11-21

The American cranberry (Vaccinium macrocarpon Ait.) is a recently domesticated, economically important, fruit crop with limited molecular resources. New genetic resources could accelerate genetic...

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• Organization: U.S. Department of Health & Human Services
• Updated: 2025-09-06

Background Blood group genotyping is increasingly utilized for prenatal diagnosis and after recent transfusions, but still lacks the specificity of serology. In whites, the presence of...

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• Organization: National Oceanic and Atmospheric Administration, Department of Commerce
• Updated: 2019-06-17T00:00:00.000+00:00

Raw DNA chromatogram data produced by the ABI 373, 377, 3130 and 3730 automated sequencing machines in ABI format. These are from fish (primarily Sebastes spp., Seriola lalandi, and several shark...

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• Organization: U.S. Department of Health & Human Services
• Updated: 2025-09-06

In sarcoidosis, host genetic factors are discussed as contributing to disease susceptibility and course. Since tumor necrosis factor (TNF)-α is a central mediator of granuloma formation and since...

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• Organization: Department of Agriculture
• Updated: 2025-11-22

Pooling individual samples prior to DNA extraction can mitigate the cost of DNA extraction and genotyping; however, these methods need to accurately generate equal representation of individuals...

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• Organization: Department of Agriculture
• Updated: 2025-05-06

Pyrethroid resistance, particularly knockdown resistance (kdr), is widespread in insect pest populations, but rarely has kdr been associated with field-level pest control failure. The prevailing...

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• Organization: Department of Agriculture
• Updated: 2025-11-21

The following is taken directly from the introduction of the paper. In this study, we used a pure drift FST model [11] which assumes all animals originated from the same ancestral population....

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• Organization: Department of the Interior
• Updated: 2025-08-26T00:00:00Z

The dataset consists of genotypes (diploid base calls at variant sites) at 3,601 anonymous sites of the Arizona Toad (Anaxyrus microscaphus) nuclear genome. The genotyped samples are...

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• Organization: Department of Agriculture
• Updated: 2025-11-21

Breedbase is a web-based, comprehensive breeding management and analysis software. It can be used to design field layouts, collect phenotypic information using tablets, support the collection of...

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• Organization: National Oceanic and Atmospheric Administration, Department of Commerce
• Updated: 2024-03-07T00:00:00.000+00:00

Acropora cervicornis, A. palmata and Orbicella faveolata are important reef-building coral species in the Florida Reef Tract (FRT). These species have experienced alarming declines throughout the...

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• Organization: Department of Agriculture
• Updated: 2025-11-21

This collection contains supplementary information for the manuscript “Genetic mapping and QTL analysis for peanut smut resistance”, which reports the genetic map and quantitative trait loci...

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• Organization: Department of the Interior
• Updated: 2024-10-30T00:00:00Z

This data set describes nuclear microsatellite genotypes derived from eight autosomal loci (BCA6, BCA9, BCA11, BCA5, CRG, OXY13, TSP1.20.09 and TSP1.20.46) and a 366 base pair portion of the...

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• Organization: U.S. Environmental Protection Agency
• Updated: 2014-06-10

The dataset provides the URLs for accessing the genome sequence data and two draft assemblies as well as fathead minnow genotyping data associated with estimating the heterozygosity of the in-bred...

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• Organization: Department of Agriculture
• Updated: 2025-11-21

[Note: This version supersedes version 1: https://doi.org/10.15482/USDA.ADC/1520889 Changes in version 2: A new Dataset was added - DataSet1-CardAlleles-iii.xlsx Datasets were renamed and...

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• Organization: Department of the Interior
• Updated: 2024-09-15T00:00:00Z

This data set describes nuclear microsatellite genotypes derived from twelve autosomal loci (6AB, Aph02, Aph08, Aph19, Aph23, Bca10, Bca11, Hhi5, Sfi11, Smo07, Smo09, and CRG), and two Z-linked...

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• Organization: Department of the Interior
• Updated: 2023-03-01T00:00:00Z

Hair samples were collected in discrete areas during radio-collar studies in Vermont under the auspices of University of Vermont IACUC protocol #17-035 (n=106), New Hampshire (n=34), and Maine...

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• Organization: National Oceanic and Atmospheric Administration, Department of Commerce
• Updated: 2024-02-29T00:00:00.000+00:00

The purpose of this study was to genetically analyze axillary process samples from ~6,000 sockeye salmon harvested in the 2006 and 2007 Districts 101 gillnet and 104 purse seine sockeye fisheries...

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