Found 58 datasets matching "phylogenetic analysis".
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Background Interest in methanogens from ruminants has resulted from the role of methane in global warming and from the fact that cattle typically lose 6 % of ingested energy as methane....
Search relevance: 143.21 | Views last month: 0 -
G-protein-coupled receptors (GPCRs) are the largest and most diverse family of transmembrane receptors. A pylogenetic analysis shows the overall relationship of 277 human GPCRs. An emphasis on...
Search relevance: 123.87 | Views last month: 0 -
Salmonella enterica subsp. enterica bacteria are important foodborne pathogens with major economic impact. Some isolates exhibit increased heat tolerance, a concern for food safety. Analysis of a...
Search relevance: 97.74 | Views last month: 0 -
Background The availability of multiple complete genome sequences from diverse taxa prompts the development of new phylogenetic approaches, which attempt to incorporate information...
Search relevance: 93.22 | Views last month: 2 -
Background Polytene chromosome banding patterns have long been used by Drosophila evolutionists to infer degree of relatedness among taxa. Recently, nucleotide sequences have preempted...
Search relevance: 84.76 | Views last month: 1 -
The generic placement of the strawberry leaf blight fungus, formerly known as Phomopsis obscurans has always been subject to uncertainty. These datasets provide the phylogenetic evidence based on...
Search relevance: 77.00 | Views last month: 0 -
Background Gene fusions can be used as tools for functional prediction and also as evolutionary markers. Fused genes often show a scattered phyletic distribution, which suggests a role...
Search relevance: 72.95 | Views last month: 3 -
Amplicon sequencing utilizing next-generation platforms has significantly transformed how research is conducted, specifically microbial ecology. However, primer and sequencing platform biases can...
Search relevance: 66.95 | Views last month: 0 -
Background Based on sequence similarity, the superfamily of G protein-coupled receptors (GPRs) can be subdivided into several subfamilies, the members of which often share similar...
Search relevance: 55.64 | Views last month: 0 -
Sustainable culture of sablefish (Anoplopoma fimbria) is an active research area at NWFSC, with a primary objective of rearing a human food source under healthy, economic, and sustainable...
Search relevance: 51.69 | Views last month: 0 -
Dollar spot is one of the most destructive globally distributed diseases of turfgrass. The identity of the fungus responsible for the disease has been the subject of debate for more than 75...
Search relevance: 48.10 | Views last month: 1 -
Gravity regulates the magnitude and direction of a trans-cell calcium current in germinating spores of Ceratopteris richardii. Blocking this current with nifedipine blocks the spore's downward...
Search relevance: 47.79 | Views last month: 1 -
EXO70s are uniquely expanded in land plants compared to all other eukaryotic lineages. The functional implications of this expansion and diversification on the conserved role of EXO70 as a subunit...
Search relevance: 47.51 | Views last month: 0 -
Salmonella spp. are frequently shed by wildlife including turtles, but S. enterica subsp. enterica serovar Typhimurium or lesions associated with Salmonella are rare in turtles. Between 1996 and...
Search relevance: 47.51 | Views last month: 0 -
A new species of downy mildew (Oomycota, Peronosporales) is reported. This dataset contains alignments of DNA sequences (cox2 and LSU) markers, alignment of cox2 marker to be used in species...
Search relevance: 47.50 | Views last month: 0 -
The validity of Myotis occultus as a species unique from M. lucifugus has been a source of debate. Most recently, many authorities treat M. occultus as a distinct species, at least in part because...
Search relevance: 47.13 | Views last month: 0 -
Contradictory lines of evidence have made it difficult to resolve the phylogenetic history of the legume diversification era; this is true for the backbone topology, and for the number and timing...
Search relevance: 45.84 | Views last month: 0 -
Brief description of study aimsFungal denitrification is a biogeochemical process that releases nitrous oxide (N2O), a potent greenhouse gas. The NOR1 gene is part of the denitrification pathway...
Search relevance: 45.11 | Views last month: 1 -
Comparative genomics provides at least three methods for identifying functional links between genes: examination of phylogenetic distributions, analysis of conserved proximity and observations of...
Search relevance: 44.96 | Views last month: 0 -
Background Horizontal gene transfer (HGT) played an important role in shaping microbial genomes. In addition to genes under sporadic selection, HGT also affects housekeeping genes and...
Search relevance: 44.51 | Views last month: 0
