Found 15 datasets matching "snp-genotyping".
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Background Single nucleotide polymorphisms (SNPs) are the foundation of powerful complex trait and pharmacogenomic analyses. The availability of large SNP databases, however, has...
Search relevance: 153.12 | Views last month: 0 -
The following is taken directly from the introduction of the paper. In this study, we used a pure drift FST model [11] which assumes all animals originated from the same ancestral population....
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This collection contains supplementary information for the manuscript “Genetic mapping and QTL analysis for peanut smut resistance”, which reports the genetic map and quantitative trait loci...
Search relevance: 76.96 | Views last month: 0 -
Acropora cervicornis, A. palmata and Orbicella faveolata are important reef-building coral species in the Florida Reef Tract (FRT). These species have experienced alarming declines throughout the...
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The purpose of this study was to genetically analyze axillary process samples from ~6,000 sockeye salmon harvested in the 2006 and 2007 Districts 101 gillnet and 104 purse seine sockeye fisheries...
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Background Single-nucleotide polymorphisms (SNPs) are considered to be useful polymorphic markers for genetic studies of polygenic traits. Single-stranded conformational polymorphism...
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The American cranberry (Vaccinium macrocarpon Ait.) is a recently domesticated, economically important, fruit crop with limited molecular resources. New genetic resources could accelerate genetic...
Search relevance: 48.56 | Views last month: 1 -
High-throughput sequencing (HTS) of reduced representation genomic libraries has ushered in an era of genotyping-by-sequencing (GBS), where genome-wide genotype data can be obtained for nearly any...
Search relevance: 47.34 | Views last month: 4 -
As part of our project, “Developing Association Mapping in Polyploid Perennial Biofuel Grasses” (DOE-USDA Plant Feedstock Genomics for Bioenergy Program grant DE-A102-07ER64454)*, two SNP...
Search relevance: 46.74 | Views last month: 0 -
This dataset contains genomic records from 184 California Gnatcatchers (Polioptila californica) collected at 18 sites in southern California (USA), 13 sites in Baja California (Mexico), and 17...
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Data reported in research published in Crop Science, “Mapping the quantitative field resistance to stripe rust in a hard winter wheat population ‘Overley’ × ‘Overland.’” Authors are Wardah...
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[Note: This version supersedes version 1: https://doi.org/10.15482/USDA.ADC/1520889 Changes in version 2: A new Dataset was added - DataSet1-CardAlleles-iii.xlsx Datasets were renamed and...
Search relevance: 44.47 | Views last month: 1 -
This collection contains supplementary data for the manuscript "Genotypic characterization of the U.S. Peanut Core Collection", which describes genotyping results for the USDA peanut core...
Search relevance: 36.88 | Views last month: 0 -
These are data on variation in host specificity and genetics among 16 populations of an aphid parasitoid, Aphelinus certus, 15 from Asia and one from North America. Host range was the same for all...
Search relevance: 32.45 | Views last month: 1 -
Salmonella pangenome graph and variant call data for 539,283 genomesDescription:Salmonella enterica causes human disease and decreases agricultural production. The overall goals of this project is...
Search relevance: 28.16 | Views last month: 2
