Data from: Impact of larval food source on the stability of the <i>Bactrocera dorsalis </i>microbiome
Resources
10 resources available
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Control Processing and Check.zip
ZIP -
Processing and Main Output.zip
ZIP -
VkMetaData.csv
CSV -
Vkrarefy.csv
CSV -
OccAbunCore.tsv
TSV -
SloanNeutralModeling_VK.R
R -
IndividualOTUKWtest_VK.R
R -
NMDSandADONIScode.R
R -
AlphaDiversity_VK.R
R -
RelativeAbundancePlots_VK.R
R
Complete Metadata
| @type | dcat:Dataset |
|---|---|
| accessLevel | public |
| bureauCode |
[
"005:18"
]
|
| contactPoint |
{
"fn": "Mason, Charles",
"hasEmail": "mailto:charles.mason@usda.gov"
}
|
| description | <p dir="ltr">We conducted a fly rearing experiment to characterize diet-induced changes in the microbiome of female <i>Bactrocera dorsalis</i>. In order to explicitly investigate the impacts of larval diet on the microbiome, including potential stable bacterial constituents of <i>B. dorsalis</i>, we performed 16S rRNA sequencing on the gut tissues of teneral female flies reared from 4 different host fruits (guava, mango, papaya, and rose-apple) infested using a single cohort of wild <i>B. dorsalis</i> that emerged from tropical almond (mother flies). We provide processed data and R code for our analysis.</p><p dir="ltr">Raw data (.fastq files) for analysis are located at NCBI SRA under accession number PRJNA1061202</p> |
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|
| identifier | 10.15482/USDA.ADC/24969123.v1 |
| keyword |
[
"16S amplicon analysis code",
"gut",
"insect",
"microbiome",
"reproduction"
]
|
| license | https://creativecommons.org/licenses/by/4.0/ |
| modified | 2024-07-19 |
| programCode |
[
"005:040"
]
|
| publisher |
{
"name": "Agricultural Research Service",
"@type": "org:Organization"
}
|
| temporal | 2022-07-01/1022-09-30 |
| title | Data from: Impact of larval food source on the stability of the <i>Bactrocera dorsalis </i>microbiome |
