Found 97 datasets matching "microbiome".
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This repository contains raw and intermediate data files as well as analysis code from the manuscript "Evaluating the Analytical Performance of Direct-to-Consumer Gut Microbiome Testing Services"....
- zip file contains fastq files within two folders depending on the donor
- zip folder includes: r markdowns, rdata, csv, png
- zip folder includes: fastq files (for 16s), r markdowns, rdata, csv, xlsx
- html
Search relevance: 129.05 | Views last month: 2 -
Tara microbiome is the latest Tara expedition focused on plankton. The Microbiome Mission will help us understand the services provided by this essential ecosystem of the Ocean, its microbiome, an...
Search relevance: 127.97 | Views last month: 0 -
This repository contains raw and intermediate data files as well as analysis code from the manuscript "Evaluating the Analytical Performance of Direct-to-Consumer Gut Microbiome Testing Services"....
- zip file contains fastq files within two folders depending on the donor
- zip folder includes: r markdowns, rdata, csv, png
- zip folder includes: fastq files (for 16s), r markdowns, rdata, csv, xlsx
- html
Search relevance: 123.38 | Views last month: 0 -
Sustainable culture of sablefish (Anoplopoma fimbria) is an active research area at NWFSC, with a primary objective of rearing a human food source under healthy, economic, and sustainable...
Search relevance: 122.96 | Views last month: 0 -
An abundance matrix (BM_OTU.xlsx) contains rows as OTU, columns as samples, and entries representing the abundance of each OTU as a ratio of all sequences obtained for each individual sample....
Search relevance: 121.64 | Views last month: 2 -
The effect of dietary lead (Pb) on the murine intestinal microbiome was explored to determine if there was an association between microflora modulation and Pb source. Mice were treated with...
Search relevance: 120.32 | Views last month: 0 -
This repository provides the raw data, analysis code, and results generated during a systematic evaluation of the impact of selected experimental protocol choices on the metagenomic sequencing...
Search relevance: 119.96 | Views last month: 0 -
Microbiome analyses. This dataset is associated with the following publication: Griggs, J., L. Chi, N. Hanley, M. Kohan, K. Herbin-Davis, D. Thomas, K. Lu, R. Fry, and K. Bradham....
Search relevance: 118.17 | Views last month: 0 -
The fasta file (BM_OTU.fasta) contain the sequences of the bacterial 16S rRNA-encoding V4 region gene (≈250 nt) for each Operational Taxonomic Unit (OTU). This dataset is associated with the...
Search relevance: 118.13 | Views last month: 9 -
This repository provides the raw data, analysis code, and results generated during a systematic evaluation of the impact of selected experimental protocol choices on the metagenomic sequencing...
Search relevance: 114.93 | Views last month: 0 -
An abundance matrix (BM_taxonomic_lineage.xlsx) contains rows as taxonomic lineage, columns as samples, and entries representing the abundance of each lineage as a ratio of all sequences obtained...
Search relevance: 113.40 | Views last month: 0 -
We conducted a fly rearing experiment to characterize diet-induced changes in the microbiome of female Bactrocera dorsalis. In order to explicitly investigate the impacts of larval diet on the...
Search relevance: 112.03 | Views last month: 0 -
This study s goal was to examine if any salivary microbiome changes were observed in astronauts as a result of spaceflight. In addition this study looked for any microbiome signature that may be...
Search relevance: 109.58 | Views last month: 0 -
This repository includes the raw data, analysis code, and results of a systematic analysis of natural transformation (i.e., horizontal gene transfer; HGT) of bacteria in a naturally occurring...
Search relevance: 107.93 | Views last month: 0 -
This repository includes the raw data, analysis code, and results of a systematic analysis of natural transformation (i.e., horizontal gene transfer; HGT) of bacteria in a naturally occurring...
Search relevance: 107.56 | Views last month: 0 -
Mediterranean fruit fly males reared for sterile insect technique (SIT) have been shown to have differences in their microbiomes relative to other population sources, which has been postulated to...
Search relevance: 104.13 | Views last month: 0 -
Species- and sex-related differences of four laboratory tephritid fruit fly (Diptera: Tephritidae) gut microbiomes evaluated with full-length 16S rRNA PacBio Kinnex sequencing. Insect gut...
Search relevance: 103.91 | Views last month: 0 -
Space travel is associated with continuous low-dose-rate exposure to high Linear Energy Transfer (LET) radiation. Pathophysiological manifestations after low-dose radiation exposure are strongly...
Search relevance: 100.17 | Views last month: 0 -
Space travel is associated with continuous low-dose-rate exposure to high Linear Energy Transfer (LET) radiation. Pathophysiological manifestations after low-dose radiation exposure are strongly...
Search relevance: 96.04 | Views last month: 0 -
16S amplicon sequencing data used to determine the changes in the soybean root-associated microbiome in response to cerium oxide nanoparticles (CeNPs) in a natural soil. Samples include low (1...
Search relevance: 92.83 | Views last month: 0
