Data from: Metagenomes and Metagenome-Assembled Genomes from Ex Vivo Fecal Incubations of Six Unique Donors
This is a dataset consisting of donor-specific collections of 78 metagenomes (13 / donor) and 143 metagenome-assembled genomes (MAGs) representing the gut microbiomes of six healthy adult human donors. Raw sequencing data and MAG sequence data will be available in NCBI under BioProject accession PRJNA961974 (https://www.ncbi.nlm.nih.gov/bioproject/PRJNA961974). Spreadsheets attached to this dataset include individual accession numbers and sequencing depth for the raw data; and assembly and NCBI accession numbers, binning information, quality metrics, and taxonomic assignments for the MAGs.Resources in this dataset:Resource Title: Metagenome assembled genome (MAG) information File Name: MAGs_information_table.csvResource Title: Metagenome sample information File Name: Metagenomes_information_table.csvResource Title: Metagenome metadata table File Name: Metagenome_metadata_table.xlsxResource Title: MAG metadata table File Name: MAG_metadata_table.xlsx
Complete Metadata
| @type | dcat:Dataset |
|---|---|
| accessLevel | public |
| bureauCode |
[
"005:18"
]
|
| contactPoint |
{
"fn": "Narrowe, Adrienne",
"hasEmail": "mailto:adrienne.narrowe@usda.gov"
}
|
| description | <p dir="ltr">This is a dataset consisting of donor-specific collections of 78 metagenomes (13 / donor) and 143 metagenome-assembled genomes (MAGs) representing the gut microbiomes of six healthy adult human donors. Raw sequencing data and MAG sequence data will be available in NCBI under BioProject accession PRJNA961974 (<a href="https://www.ncbi.nlm.nih.gov/bioproject/PRJNA961974">https://www.ncbi.nlm.nih.gov/bioproject/PRJNA961974</a>). Spreadsheets attached to this dataset include individual accession numbers and sequencing depth for the raw data; and assembly and NCBI accession numbers, binning information, quality metrics, and taxonomic assignments for the MAGs.</p><p dir="ltr">Resources in this dataset:</p><ul><li>Resource Title: Metagenome assembled genome (MAG) information File Name: MAGs_information_table.csv</li><li>Resource Title: Metagenome sample information File Name: Metagenomes_information_table.csv</li><li>Resource Title: Metagenome metadata table File Name: Metagenome_metadata_table.xlsx</li><li>Resource Title: MAG metadata table File Name: MAG_metadata_table.xlsx</li></ul><p></p> |
| distribution |
[
{
"@type": "dcat:Distribution",
"title": "MAGs_information_table_0.csv",
"format": "csv",
"mediaType": "text/plain",
"downloadURL": "https://ndownloader.figshare.com/files/43375644"
},
{
"@type": "dcat:Distribution",
"title": "Metagenomes_information_table.csv",
"format": "csv",
"mediaType": "text/plain",
"downloadURL": "https://ndownloader.figshare.com/files/43375647"
},
{
"@type": "dcat:Distribution",
"title": "MAG_metadata_table.xlsx",
"format": "xlsx",
"mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet",
"downloadURL": "https://ndownloader.figshare.com/files/43423635"
},
{
"@type": "dcat:Distribution",
"title": "Metagenome_metadata_table.xlsx",
"format": "xlsx",
"mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet",
"downloadURL": "https://ndownloader.figshare.com/files/43423638"
}
]
|
| identifier | 10.15482/USDA.ADC/1529438 |
| keyword |
[
"ARS",
"NP306",
"data.gov",
"gut microbiome",
"metagenome assembled genomes",
"metagenomics"
]
|
| license | https://www.usa.gov/publicdomain/label/1.0/ |
| modified | 2025-11-21 |
| programCode |
[
"005:040"
]
|
| publisher |
{
"name": "Agricultural Research Service",
"@type": "org:Organization"
}
|
| spatial |
"{"type": "MultiPoint", "coordinates": [[-75.171203613281, 39.959999661031], [3.7236785888672, 51.052560082502]]}"
|
| temporal | 2022-05-01/2022-05-01 |
| title | Data from: Metagenomes and Metagenome-Assembled Genomes from Ex Vivo Fecal Incubations of Six Unique Donors |
