Found 23 datasets matching "metagenomics".
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To assess the variability of low-abundance oligonucleotide detection across sample matrices, we spiked DNA reference standards (meta sequins) into replicate wastewater DNA extracts at...
Search relevance: 134.98 | Views last month: 1 -
This dataset provides results of a targeted bacterial community metagenomic analysis of surface water, groundwater, and sand samples at Jeorse Park on Lake Michigan in East Chicago, Indiana....
Search relevance: 70.40 | Views last month: 0 -
International Space Station - Microbial Observatory of Pathogenic Virus, Bacteria, and Fungi project
This study investigated the interplay between the microbial community of the International Space Station and its crew. Environmental samples were collected from 8 habitable locations around the...
Search relevance: 44.56 | Views last month: 0 -
This study investigated the interplay between the microbial community of the International Space Station and its crew. Environmental samples were collected from 8 habitable locations around the...
Search relevance: 44.33 | Views last month: 0 -
Data were collected as part of a study to identify sources of E. coli contamination at several beaches located in the Grand Calumet River Areas of Concern, located in northern Indiana on Lake...
Search relevance: 41.85 | Views last month: 0 -
Dataset contains site x zooplankton taxa data from Lake Superior in 2016. Different tabs have data from morphological ID and from DNA metabarcoding ID with 4 different genetic markers. This...
Search relevance: 39.08 | Views last month: 0 -
The data consists of sequence reads generated from an Illumina MiSeq. This dataset is associated with the following publication: Ruth, N., N. Brinkman, M. Jahne, P. Chain, S. Keely, and M....
Search relevance: 33.98 | Views last month: 1 -
This provides taxonomic data (as relative abundances) derived from metagenomic sequencing of greywater samples. This dataset is associated with the following publication: Nagarkar, M., S. Keely,...
Search relevance: 33.75 | Views last month: 0 -
The dataset contains the raw data used for the correlation analyses. This dataset is associated with the following publications: Schaeffer, B., J. SantoDomingo, and B. Kreakie. SSWR 4.3 Tools...
Search relevance: 33.02 | Views last month: 2 -
The threat posed by infectious diseases are a major concern for global public health and the role of migratory birds in pathogen transmission is increasingly under scrutiny. Enteric viral pathogen...
Search relevance: 32.36 | Views last month: 0 -
The dataset contains the information used to generate the figures in the manuscript. The data describes the viral loss measured at all steps of sample processing, culminating in a description of...
Search relevance: 31.79 | Views last month: 0 -
Two sets of triplicate SBRs were operated for ~three months in three-liter glass beakers with an active volume of two liters in a temperature controlled room, as described in Maile-Moskowitz et...
Search relevance: 31.02 | Views last month: 1 -
This is a dataset consisting of donor-specific collections of 78 metagenomes (13 / donor) and 143 metagenome-assembled genomes (MAGs) representing the gut microbiomes of six healthy adult human...
Search relevance: 30.15 | Views last month: 0 -
The raw data consisted of demultiplexed fastq files pairs (R1.fastq and R2.fastq) per sample accessible on the NCBI Sequences Read Archive (SRA) under the BioProject accession numbers...
Search relevance: 29.90 | Views last month: 0 -
The raw sequencing data for this study have been deposited in the European Nucleotide Archive (ENA) at EMBL-EBI under accession number PRJEB40814 with the following BioSample numbers: SAMEA7465213...
Search relevance: 29.88 | Views last month: 1 -
Log10 fecal score ratios for eligible microbial source tracking qPCR assays. This dataset is associated with the following publication: Brumfield, K.D., J.A. Cotruvo, O. Shanks, M. Sivaganesan,...
Search relevance: 29.88 | Views last month: 0 -
The raw sequencing data for this study have been deposited in the European Nucleotide Archive (ENA) at EMBL-EBI under accession number PRJEB40814 with the following BioSample numbers: SAMEA7465213...
Search relevance: 29.79 | Views last month: 0 -
This repository contains raw and intermediate data files as well as analysis code from the manuscript "Evaluating the Analytical Performance of Direct-to-Consumer Gut Microbiome Testing Services"....
- zip file contains fastq files within two folders depending on the donor
- zip folder includes: r markdowns, rdata, csv, png
- zip folder includes: fastq files (for 16s), r markdowns, rdata, csv, xlsx
- html
Search relevance: 29.59 | Views last month: 2 -
Dataset includes the SRA accessions of the sequencing data used to benchmark the MetaCompare 2.0 pipeline as well as tables of bacterial taxa and antibiotic resistance genes used to perform the...
Search relevance: 29.53 | Views last month: 0 -
In Rodent Research Reference Mission-1 (RRRM-1), forty female BALB/cAnNTac mice were flown on the International Space Station. To assess differences in outcomes due to age, twenty 10-12 week-old...
Search relevance: 27.40 | Views last month: 0
