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Deep SEARCH eDNA metabarcoding data
The Deep SEARCH Project (Deep sea exploration to advance research on cold corals/canyon/cold seep habitats) included a cruise in April 2019 aboard the NOAA ship Ron Brown to various sites along the Mid-Atlantic North American coast. An ROV was used to collect samples of bottom water at these sites, which were then subjected to eDNA extraction and analyses. This data release describes what samples were collected for eDNA analyses, and how eDNA was extracted, sequenced, and bioinformatically analyzed.
Complete Metadata
| accessLevel | public |
|---|---|
| bureauCode |
[
"010:12"
]
|
| contactPoint |
{
"fn": "Aaron W. Aunins",
"@type": "vcard:Contact",
"hasEmail": "mailto:aaunins@usgs.gov"
}
|
| description | The Deep SEARCH Project (Deep sea exploration to advance research on cold corals/canyon/cold seep habitats) included a cruise in April 2019 aboard the NOAA ship Ron Brown to various sites along the Mid-Atlantic North American coast. An ROV was used to collect samples of bottom water at these sites, which were then subjected to eDNA extraction and analyses. This data release describes what samples were collected for eDNA analyses, and how eDNA was extracted, sequenced, and bioinformatically analyzed. |
| distribution |
[
{
"@type": "dcat:Distribution",
"title": "Digital Data",
"format": "XML",
"accessURL": "https://doi.org/10.5066/P1HYVYFZ",
"mediaType": "application/http",
"description": "Landing page for access to the data"
},
{
"@type": "dcat:Distribution",
"title": "Original Metadata",
"format": "XML",
"mediaType": "text/xml",
"description": "The metadata original format",
"downloadURL": "https://data.usgs.gov/datacatalog/metadata/USGS.66859dddd34e8a8b016cd9f3.xml"
}
]
|
| identifier | http://datainventory.doi.gov/id/dataset/USGS_66859dddd34e8a8b016cd9f3 |
| keyword |
[
"Environmental DNA",
"Environmental DNA metabarcoding",
"Eukaryotic 18S rDNA metabarcoding",
"Eukaryotic cox1 mitochondrial metabarcoding",
"Ocean metagenome",
"USGS:66859dddd34e8a8b016cd9f3",
"biota"
]
|
| modified | 2024-07-11T00:00:00Z |
| publisher |
{
"name": "U.S. Geological Survey",
"@type": "org:Organization"
}
|
| spatial | -79.6289, 27.0591, -63.9844, 41.5744 |
| theme |
[
"Geospatial"
]
|
| title | Deep SEARCH eDNA metabarcoding data |
