Gene expression and chemical exposure data for larval Pimephales promelas exposed to one of four pyrethroid pesticides.
Uploaded datasets are detailed exposure information (chemical concentrations and water quality parameters) for exposures conducted in a flow through diluter system with larval Pimephales promelas to four different pyrethroid pesticides. The GEO submission URL links to the NCBI GEO database and contains gene expression data from whole larvae exposed to different concentrations of the pyrethroids across multiple experiments.
This dataset is associated with the following publication:
Biales, A., M. Kostich, A. Batt, M. See, R. Flick, D. Gordon, J. Lazorchak, and D. Bencic. Initial Development of a Multigene Omics-Based Exposure Biomarker for Pyrethroid Pesticides. CRITICAL REVIEWS IN ENVIRONMENTAL SCIENCE AND TECHNOLOGY. CRC Press LLC, Boca Raton, FL, USA, 179(0): 27-35, (2016).
Complete Metadata
| accessLevel | public |
|---|---|
| bureauCode |
[
"020:00"
]
|
| contactPoint |
{
"fn": "Adam Biales",
"hasEmail": "mailto:biales.adam@epa.gov"
}
|
| description | Uploaded datasets are detailed exposure information (chemical concentrations and water quality parameters) for exposures conducted in a flow through diluter system with larval Pimephales promelas to four different pyrethroid pesticides. The GEO submission URL links to the NCBI GEO database and contains gene expression data from whole larvae exposed to different concentrations of the pyrethroids across multiple experiments. This dataset is associated with the following publication: Biales, A., M. Kostich, A. Batt, M. See, R. Flick, D. Gordon, J. Lazorchak, and D. Bencic. Initial Development of a Multigene Omics-Based Exposure Biomarker for Pyrethroid Pesticides. CRITICAL REVIEWS IN ENVIRONMENTAL SCIENCE AND TECHNOLOGY. CRC Press LLC, Boca Raton, FL, USA, 179(0): 27-35, (2016). |
| distribution |
[
{
"title": "https://www.ncbi.nlm.nih.gov/gquery/?term=GSE84475",
"accessURL": "https://www.ncbi.nlm.nih.gov/gquery/?term=GSE84475"
},
{
"title": "Table 1 - Water Quality Parameters.xlsx",
"mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet",
"downloadURL": "https://pasteur.epa.gov/uploads/158/Table%201%20-%20Water%20Quality%20Parameters.xlsx"
},
{
"title": "Table 2 - Phase 1 per tank per day chemistry.xlsx",
"mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet",
"downloadURL": "https://pasteur.epa.gov/uploads/158/Table%202%20-%20Phase%201%20per%20tank%20per%20day%20chemistry.xlsx"
},
{
"title": "Table 3 - P2 Chemistry Results Per Day and Per Tank.xlsx",
"mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet",
"downloadURL": "https://pasteur.epa.gov/uploads/158/Table%203%20-%20P2%20Chemistry%20Results%20Per%20Day%20and%20Per%20Tank.xlsx"
},
{
"title": "Table 4 - Functional Annotation Clustering_DAVID.xlsx",
"mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet",
"downloadURL": "https://pasteur.epa.gov/uploads/158/Table%204%20%20-%20Functional%20Annotation%20Clustering_DAVID.xlsx"
},
{
"title": "Table 5 - Uncalibrated eAUCs.xlsx",
"mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet",
"downloadURL": "https://pasteur.epa.gov/uploads/158/Table%205%20-%20Uncalibrated%20eAUCs.xlsx"
},
{
"title": "Table 6 CALIBRATED EAUCS.docx",
"mediaType": "application/vnd.openxmlformats-officedocument.wordprocessingml.document",
"downloadURL": "https://pasteur.epa.gov/uploads/158/Table%206%20CALIBRATED%20EAUCS.docx"
}
]
|
| identifier | A-mcvw-158 |
| keyword |
[
"biomarker",
"fish",
"pyrethroids",
"transcriptomics"
]
|
| license | https://pasteur.epa.gov/license/sciencehub-license.html |
| modified | 2016-07-13 |
| programCode |
[
"020:000"
]
|
| publisher |
{
"name": "U.S. EPA Office of Research and Development (ORD)",
"subOrganizationOf": {
"name": "U.S. Environmental Protection Agency",
"subOrganizationOf": {
"name": "U.S. Government"
}
}
}
|
| references |
null
|
| rights |
null
|
| title | Gene expression and chemical exposure data for larval Pimephales promelas exposed to one of four pyrethroid pesticides. |
