Found 49 datasets matching "genome-annotation".
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Background The recent draft assembly of the human genome provides a unified basis for describing genomic structure and function. The draft is sufficiently accurate to provide useful...
Search relevance: 241.00 | Views last month: 0 -
Background: Standard archival sequence databases have not been designed as tools for genome annotation and are far from being optimal for this purpose. We used the database of Clusters...
Search relevance: 213.52 | Views last month: 0 -
Background Annotation of eukaryotic genomes is a complex endeavor that requires the integration of evidence from multiple, often contradictory, sources. With the ever-increasing amount...
Search relevance: 208.14 | Views last month: 0 -
Annotation data were generated from existing genome assemblies of Calonectria henricotiae JAC13-131 (aka P-10-5865) and C. pseudonaviculata JAC13-27 (aka CT1). Gene prediction and annotations were...
Search relevance: 173.57 | Views last month: 0 -
The dataset contains the full fathead minnow (FHM) reference genome and annotation data as well all DNA sequencing data (PacBio long reads and Illumina paired-end reads) and RNA-seq data that were...
Search relevance: 165.23 | Views last month: 4 -
Background Currently, most genome annotation is curated by centralized groups with limited resources. Efforts to share annotations transparently among multiple groups have not yet been...
Search relevance: 123.58 | Views last month: 0 -
This dataset presents the Halyomorpha halys Official Gene Set (OGS) v1.2. OGSv1.2 is an update of Halyomorpha halys OGSv1.1 (https://doi.org/10.15482/USDA.ADC/1504240) to the coordinates of genome...
Search relevance: 121.62 | Views last month: 1 -
Manual annotation at the i5k Workspace@NAL (https://i5k.nal.usda.gov) is the review and improvement of gene models derived from computational gene prediction. Community curators compare an...
Search relevance: 118.38 | Views last month: 2 -
Background Since the genome of Escherichia coli K-12 was initially annotated in 1997, additional functional information based on biological characterization and functions of...
Search relevance: 116.36 | Views last month: 0 -
Within this dataset: Genome assembly of Linum lewisii (NDSU_LiLewi_1.0.fasta) First 9 scaffolds represent all 9 chromosomes (e.g. Scaffold_1 is Chromosome 1, Scaffold_9 is Chromosome...
Search relevance: 91.43 | Views last month: 1 -
Genome sequence with structural and functional annotation files of LoarK31 haplotype 1 and haplotype 2 genome assembly reported in the manuscript "A haplotype-resolved genome assembly of hexaploid...
Search relevance: 81.86 | Views last month: 0 -
Sequence Retrieval allows users to download nucleotide and protein sequences including chromosomes, scaffolds, genes, mRNAs, transcript coding sequences, protein, reftrans contigs and unigene...
Search relevance: 79.60 | Views last month: 0 -
Genome sequence and annotation files of Lpman haplotype 1 and haplotype 2 genome assembly reported in the manuscript "Haplotype-resolved genome assembly of ‘Manhattan’ perennial ryegrass (Lolium...
Search relevance: 78.50 | Views last month: 0 -
Genome sequence with gene annotation files of the creeping bentgrass cultivar 'Declaration' genome assembly reported in the manuscript "Haplotype-resolved chromosome-level genome assembly of...
Search relevance: 77.85 | Views last month: 1 -
We present the annotation results of 15 arthropod proteomes using an open source, open access and containerized pipeline for genome-scale functional annotation of insect proteomes and apply it to...
Search relevance: 76.67 | Views last month: 0 -
Whole Genome Shotgun (WGS) projects are genome assemblies of incomplete genomes or incomplete chromosomes of prokaryotes or eukaryotes that are generally being sequenced by a whole genome shotgun...
Search relevance: 75.52 | Views last month: 1 -
The current speed of sequencing already exceeds the capability of annotation. A new method for functional annotation is proposed using the conservation patterns of gene clusters and has been...
Search relevance: 69.73 | Views last month: 0 -
The complete genome sequence data of S. aureus SJTUF_J27 isolated from seaweed in China is reported here. The size of the genome is 2.8 Mbp with 32.9% G+C content, consisting of 2614 coding...
Search relevance: 69.22 | Views last month: 0 -
Annotation data of genome assemblies of Streptomyces spp. isolated from agricultural soil. Resources in this dataset:Resource Title: Annotation data for MCL20-2. File Name:...
Search relevance: 65.42 | Views last month: 0 -
The Leptinotarsa decemlineata genome was recently sequenced and annotated as part of the i5k pilot project by the Baylor College of Medicine. This dataset presents the Leptinotarsa decemlineata...
Search relevance: 63.31 | Views last month: 0
