Found 56 datasets matching "16S rRNA gene".
-
Data generated to test nitrification inhibition of chromium. This dataset is associated with the following publication: Kapoor, V., M. Elk, X. Li, C. Impellitteri , and J. Santodomingo. Effects...
Search relevance: 197.30 | Views last month: 0 -
Data include microbial count data (CFUs), 16S-rRNA copy number data (qPCR), and microbial community (microbiome) data from the guts of the invasive tephritid fruit flies, melon fly (Zeugodacus...
Search relevance: 180.42 | Views last month: 0 -
This dataset provides results of a targeted bacterial community metagenomic analysis of surface water, groundwater, and sand samples at Jeorse Park on Lake Michigan in East Chicago, Indiana....
Search relevance: 164.96 | Views last month: 0 -
In order to determine the innate microbial community of shale gas reservoirs and how they are impacted by hydraulic fracturing, this study analyzed biomass collected from produced water and rock...
Search relevance: 157.00 | Views last month: 0 -
Background Microorganisms inhabiting subterranean oil fields have recently attracted much attention. Since intact groundwater can easily be obtained from the bottom of underground...
Search relevance: 155.66 | Views last month: 0 -
A table (DP_OTU.xlsx) contains rows as OTUs, columns as samples, and entries representing the abundance of each OTU. This dataset is associated with the following publication: Gomez-Alvarez, V.,...
Search relevance: 149.07 | Views last month: 2 -
Data were collected in August and September 2015 for analysis of bacteria communities of the Grand Calumet River and associated shorelines. Water samples were collected on three occasions...
Search relevance: 130.66 | Views last month: 0 -
Continuous monitoring of bacterial community structure in the ISS-Kibo. This data contains numerous sequence reads of 16S rRNA gene fragments.
Search relevance: 106.33 | Views last month: 0 -
Continuous monitoring of bacterial community structure in the ISS-Kibo. This data contains numerous sequence reads of 16S rRNA gene fragments.
Search relevance: 106.33 | Views last month: 0 -
The data set includes abundance tables obtained after processing 16S rRNA gene sequences and 18S rRNA gene sequences using bioinformatic software. Sequences were extracted from periphyton samples...
Search relevance: 98.75 | Views last month: 1 -
PS_GenBank.fasta file contain the sequences of the bacterial 16S rRNA-encoding gene for each representative sequence. The sequence containing four hypervariable regions was amplified using the...
Search relevance: 98.56 | Views last month: 1 -
The files in this data release are the raw DNA sequence files referenced in the journal article by Goldsmith and others (2018) entitled "Comparison of microbiomes of cold-water corals Primnoa...
Search relevance: 97.69 | Views last month: 0 -
Background Interest in methanogens from ruminants has resulted from the role of methane in global warming and from the fact that cattle typically lose 6 % of ingested energy as methane....
Search relevance: 96.64 | Views last month: 0 -
The fasta file (BM_OTU.fasta) contain the sequences of the bacterial 16S rRNA-encoding V4 region gene (≈250 nt) for each Operational Taxonomic Unit (OTU). This dataset is associated with the...
Search relevance: 94.72 | Views last month: 9 -
Data from S&T Project 7134. Soil and water samples from constructed wetlands at an advanced water treatment facility in Oxnard, CA were analyzed by 16S rRNA gene sequencing to characterize...
Search relevance: 94.67 | Views last month: 0 -
Data from S&T Project 7134. Soil and water samples from constructed wetlands at an advanced water treatment facility in Oxnard, CA were analyzed by 16S rRNA gene sequencing to characterize...
Search relevance: 93.91 | Views last month: 0 -
The impact of lactose on the gut microbiota of healthy adults was examined, using a short-term, in vitro strategy where fecal samples harvested from 18 donors were cultured anaerobically with and...
Search relevance: 92.43 | Views last month: 0 -
The dataset contains sequencing read counts of fish prey eDNA metabarcoding (using primers targeting the 16S rRNA mitochondrial gene) that were extracted from fecal and cloacal swab samples...
Search relevance: 90.73 | Views last month: 0 -
In vitro study of the effects on the human gut microbiota of lemon pectins with two different molecular weights and having varying degrees of esterification. Data collected following incubations...
Search relevance: 90.72 | Views last month: 0 -
The SHIME® (Simulator of the Human Intestinal Microbial Ecology) was used for in vitro cultivation of the human gut microbiota (3 donors) with additions of either soluble or insoluble fractions...
Search relevance: 89.28 | Views last month: 3
