Found 28 datasets matching "sequence-annotation".
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Background: Standard archival sequence databases have not been designed as tools for genome annotation and are far from being optimal for this purpose. We used the database of Clusters...
Search relevance: 131.64 | Views last month: 0 -
Background Currently, most genome annotation is curated by centralized groups with limited resources. Efforts to share annotations transparently among multiple groups have not yet been...
Search relevance: 115.44 | Views last month: 0 -
Genome sequence with gene annotation files of the creeping bentgrass cultivar 'Declaration' genome assembly reported in the manuscript "Haplotype-resolved chromosome-level genome assembly of...
Search relevance: 69.54 | Views last month: 0 -
Genome sequence with structural and functional annotation files of LoarK31 haplotype 1 and haplotype 2 genome assembly reported in the manuscript "A haplotype-resolved genome assembly of hexaploid...
Search relevance: 67.26 | Views last month: 0 -
Genome sequence and annotation files of Lpman haplotype 1 and haplotype 2 genome assembly reported in the manuscript "Haplotype-resolved genome assembly of ‘Manhattan’ perennial ryegrass (Lolium...
Search relevance: 65.23 | Views last month: 0 -
Conserved Domain Database (CDD) is a protein annotation resource that consists of a collection of well-annotated multiple sequence alignment models for ancient domains and full-length proteins.
Search relevance: 62.00 | Views last month: 0 -
Sequence Retrieval allows users to download nucleotide and protein sequences including chromosomes, scaffolds, genes, mRNAs, transcript coding sequences, protein, reftrans contigs and unigene...
Search relevance: 61.83 | Views last month: 0 -
The Universal Protein Resource (UniProt) is a comprehensive resource for protein sequence and annotation data. The UniProt databases are the UniProt Knowledgebase (UniProtKB), the UniProt...
Search relevance: 60.78 | Views last month: 1 -
Background Annotation of eukaryotic genomes is a complex endeavor that requires the integration of evidence from multiple, often contradictory, sources. With the ever-increasing amount...
Search relevance: 53.11 | Views last month: 0 -
These files represent the final annotations for two hydrangea genomes derived from BRAKER2 using total RNAs extracted from seven tissue types, including sepals, buds, flowers, nodes, internodes,...
Search relevance: 52.52 | Views last month: 3 -
This dataset presents the Halyomorpha halys Official Gene Set (OGS) v1.2. OGSv1.2 is an update of Halyomorpha halys OGSv1.1 (https://doi.org/10.15482/USDA.ADC/1504240) to the coordinates of genome...
Search relevance: 52.11 | Views last month: 1 -
Not only is cacao the basic ingredient in the world’s favorite confection, chocolate, but it provides a livelihood for over 6.5 million farmers in Africa, South America and Asia and ranks as one...
Search relevance: 50.03 | Views last month: 0 -
Background The recent draft assembly of the human genome provides a unified basis for describing genomic structure and function. The draft is sufficiently accurate to provide useful...
Search relevance: 49.36 | Views last month: 0 -
Background: Classic methods of identifying genes involved in neural function include the laborious process of behavioral screening of mutagenized flies and then rescreening candidate...
Search relevance: 47.53 | Views last month: 0 -
Nonnative Phragmites australis (common reed) is widely distributed across North America and insufficient knowledge of P. australis has impeded the efficiency of management. To aid in Phragmites...
Search relevance: 47.50 | Views last month: 0 -
Background Since the genome of Escherichia coli K-12 was initially annotated in 1997, additional functional information based on biological characterization and functions of...
Search relevance: 47.06 | Views last month: 0 -
The complete genome sequence data of S. aureus SJTUF_J27 isolated from seaweed in China is reported here. The size of the genome is 2.8 Mbp with 32.9% G+C content, consisting of 2614 coding...
Search relevance: 45.86 | Views last month: 0 -
Background: Sodium bicarbonate cotransporter (NBC) genes encode proteins that execute coupled Na+ and HCO3- transport across epithelial cell membranes. We report the discovery,...
Search relevance: 43.70 | Views last month: 0 -
The pecan weevil, Curculio caryae (Horn), is an obligate feeder of pecan and native hickory throughout North America. Subsequently it is a significant agricultural pest in commercial pecan...
Search relevance: 42.42 | Views last month: 1 -
The giant reed, Arundo donax, is a perennial grass species that has become an invasive plant in many countries. Expansive stands of A. donax have significant negative impacts on available water...
Search relevance: 37.38 | Views last month: 1
