Found 129 datasets matching "16S".
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Background Ribosomal 16S DNA sequences are an essential tool for identifying and classifying microbes. High-throughput DNA sequencing now makes it economically possible to produce very...
Search relevance: 132.45 | Views last month: 0 -
Study aim was to determine establishment success of antibiotic resistance bacteria in laboratory and mass-reared Mediterranean fruit fly (Ceratitis capitata). Experiments conducted in Hilo, HI,...
Search relevance: 106.88 | Views last month: 1 -
Amplicon sequencing utilizing next-generation platforms has significantly transformed how research is conducted, specifically microbial ecology. However, primer and sequencing platform biases can...
Search relevance: 102.46 | Views last month: 0 -
Species- and sex-related differences of four laboratory tephritid fruit fly (Diptera: Tephritidae) gut microbiomes evaluated with full-length 16S rRNA PacBio Kinnex sequencing. Insect gut...
Search relevance: 94.56 | Views last month: 3 -
Experiments tested if changes in soil microbiomes within reconstructed freshwater wetlands were associated with exposure to elevated Cu concentrations originating from immersed Micronized Copper...
Search relevance: 84.76 | Views last month: 0 -
A table (DP_OTU.xlsx) contains rows as OTUs, columns as samples, and entries representing the abundance of each OTU. This dataset is associated with the following publication: Gomez-Alvarez, V.,...
Search relevance: 82.79 | Views last month: 2 -
Data include microbial count data (CFUs), 16S-rRNA copy number data (qPCR), and microbial community (microbiome) data from the guts of the invasive tephritid fruit flies, melon fly (Zeugodacus...
Search relevance: 73.73 | Views last month: 0 -
Data generated to test nitrification inhibition of chromium. This dataset is associated with the following publication: Kapoor, V., M. Elk, X. Li, C. Impellitteri , and J. Santodomingo. Effects...
Search relevance: 72.34 | Views last month: 0 -
Background Interest in methanogens from ruminants has resulted from the role of methane in global warming and from the fact that cattle typically lose 6 % of ingested energy as methane....
Search relevance: 72.10 | Views last month: 0 -
Data were collected in August and September 2015 for analysis of bacteria communities of the Grand Calumet River and associated shorelines. Water samples were collected on three occasions...
Search relevance: 71.85 | Views last month: 0 -
This data set list the distribution of microbial taxa from three sets of sampling campaigns from unit operations in two large desalination facilities in the US conducted between March and May...
Search relevance: 68.57 | Views last month: 0 -
Background Microorganisms inhabiting subterranean oil fields have recently attracted much attention. Since intact groundwater can easily be obtained from the bottom of underground...
Search relevance: 64.80 | Views last month: 0 -
This dataset provides results of a targeted bacterial community metagenomic analysis of surface water, groundwater, and sand samples at Jeorse Park on Lake Michigan in East Chicago, Indiana....
Search relevance: 62.99 | Views last month: 0 -
This repository contains raw and intermediate data files as well as analysis code from the manuscript "Evaluating the Analytical Performance of Direct-to-Consumer Gut Microbiome Testing Services"....
Search relevance: 62.96 | Views last month: 2 -
The fasta file (BM_OTU.fasta) contain the sequences of the bacterial 16S rRNA-encoding V4 region gene (≈250 nt) for each Operational Taxonomic Unit (OTU). This dataset is associated with the...
Search relevance: 62.80 | Views last month: 9 -
The impact of lactose on the gut microbiota of healthy adults was examined, using a short-term, in vitro strategy where fecal samples harvested from 18 donors were cultured anaerobically with and...
Search relevance: 62.34 | Views last month: 0 -
The Grand Calumet River flows through northwestern Indiana and was designated an EPA Area of Concern (AOC) in 1987. There are multiple legacy pollutants in the river including but not limited to...
Search relevance: 61.57 | Views last month: 0 -
PS_GenBank.fasta file contain the sequences of the bacterial 16S rRNA-encoding gene for each representative sequence. The sequence containing four hypervariable regions was amplified using the...
Search relevance: 61.10 | Views last month: 1 -
In vitro study of the effects on the human gut microbiota of lemon pectins with two different molecular weights and having varying degrees of esterification. Data collected following incubations...
Search relevance: 60.29 | Views last month: 0 -
This repository contains the code and data to reproduce the figures and analyses in the paper "Microbiota of maize kernels as influenced by Aspergillus flavus infection in susceptible and...
Search relevance: 60.01 | Views last month: 0
