Found 20 datasets matching "PacBio".
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Species- and sex-related differences of four laboratory tephritid fruit fly (Diptera: Tephritidae) gut microbiomes evaluated with full-length 16S rRNA PacBio Kinnex sequencing. Insect gut...
Search relevance: 76.57 | Views last month: 3 -
A high-quality reference genome is an essential tool for applied and basic research on arthropods. Long-read sequencing technologies may be used to generate more complete and contiguous genome...
Search relevance: 67.98 | Views last month: 2 -
[ NOTE - Data files added 2022-11-01: Test long reads - test.1.filtered.bam_.gz Test short reads R1 - testpolish_R1.fastq Test short reads R2 - testpolish_R2.fastq Chromosome 30 of H. zea -...
Search relevance: 57.21 | Views last month: 0 -
The pecan weevil, Curculio caryae (Horn), is an obligate feeder of pecan and native hickory throughout North America. Subsequently it is a significant agricultural pest in commercial pecan...
Search relevance: 41.32 | Views last month: 1 -
This dataset contains Sanger ITS sequences from biocrust lichen taxa collected at Horse Heaven Hills in Washington, USA. It also includes metagenomic biocrust lichen data from 20 plots at Horse...
Search relevance: 40.36 | Views last month: 0 -
Study aim was to determine establishment success of antibiotic resistance bacteria in laboratory and mass-reared Mediterranean fruit fly (Ceratitis capitata). Experiments conducted in Hilo, HI,...
Search relevance: 39.46 | Views last month: 1 -
The Asian giant hornet, Vespa mandarinia, has a native range that extends from northern India to East Asia. In 2019, the hornet was confirmed for the first time in North America, posing an...
Search relevance: 39.19 | Views last month: 2 -
Genome was assembled from a single male, gDNA isolated from the flight muscle using the Gentra Puregene kit. PacBio S2 sequencing at 127x coverage, polished with NextSeq-500 Illumina reads at...
Search relevance: 37.16 | Views last month: 4 -
The objective was to generate a high-quality draft assembly of the whole genome as a resource for future applications such as temporal and spatial dispersal studies of the pathogen and to...
Search relevance: 35.65 | Views last month: 1 -
The dataset contains the full fathead minnow (FHM) reference genome and annotation data as well all DNA sequencing data (PacBio long reads and Illumina paired-end reads) and RNA-seq data that were...
Search relevance: 34.20 | Views last month: 4 -
Colletotrichum shisoi is a fungal plant pathogen of Perilla frutescens, a mint species cultivated in some Asian countries but considered invasive in the United States. This dataset contains a new,...
Search relevance: 32.21 | Views last month: 1 -
This in-house annotated gene set was created using the following methods. RNA was isolated from the head and thorax segments of one adult male and one adult female pecan weevil using the NucleoMag...
Search relevance: 32.09 | Views last month: 0 -
RNA expression analysis was performed on the corpus luteum tissue at five time points after prostaglandin F2 alpha treatment of midcycle cows using an Affymetrix Bovine Gene v1 Array. The...
Search relevance: 30.58 | Views last month: 0 -
CMRG v1.00 of a small variant benchmark and structural variant benchmark focused on 273 challenging medically relevant genes for the Genome in a Bottle (GIAB) sample HG002 (aka Ashkenazi son)....
Search relevance: 30.24 | Views last month: 11 -
This study produced reference quality genomes of two cattle ticks Rhipicephalus microplus and Rhipicephalus annulatus, which can be used to identify drug targets with acaricidal activity and...
Search relevance: 29.57 | Views last month: 0 -
The precisionFDA Truth Challenge V2 aimed to assess the state-of-the-art of variant calling in difficult-to-map regions and the Major Histocompatibility Complex (MHC). Starting with FASTQ files,...
Search relevance: 27.95 | Views last month: 1 -
The ascomycete Neofusicoccum parvum, one of the causal agents of Botryosphaeria dieback, is a destructive wood‐infecting fungus and a serious threat to grape production worldwide. The capability...
Search relevance: 25.48 | Views last month: 0 -
The Cosmic Ray Exposure Sequencing Science (CRESS) payload system is a proof of concept experiment to assess the genomic impact of space radiation on seeds. CRESS was designed as a secondary...
Search relevance: 24.41 | Views last month: 0 -
Within this dataset: Genome assembly of Linum lewisii (NDSU_LiLewi_1.0.fasta) First 9 scaffolds represent all 9 chromosomes (e.g. Scaffold_1 is Chromosome 1, Scaffold_9 is Chromosome...
Search relevance: 17.97 | Views last month: 1 -
Boxwood blight disease, caused by the fungi Calonectria henricotiae and C. pseudonaviculata, is an emergent threat to natural and managed landscapes worldwide. Boxwood blight emerged for the first...
Search relevance: 11.38 | Views last month: 1
